Oryza brachyantha (malo sina): 102711500
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Entry
102711500 CDS
T02995
Name
(RefSeq) ATP-dependent DNA helicase MER3 homolog
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obr03036
]
102711500
Enzymes [BR:
obr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102711500
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
102711500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
AAA_22
IMS_HHH_1
Motif
Other DBs
NCBI-GeneID:
102711500
NCBI-ProteinID:
XP_006647521
LinkDB
All DBs
Position
2:18158597..18167641
Genome browser
AA seq
1205 aa
AA seq
DB search
MAAMGHLGDPYALHSVADLPPPFRSAFGFRYFNSLQSECFPACFLSDVNMVISAPTGSGK
TVLFELCIMRLLSRFLSSDWRFNLIKGTLKTIYIAPMKALVQEKLRDWNMKLGSLGINCL
EITGDNDFYNIKSIHDADLILTTPEKFDSVSRHGIRDGGLGFFSDIALILIDEVHLLNDP
RGAALEAIVSRIKMLSRLGTMKSAPLANVRFVAVSATIPNIEDIAEWLEVPSEGIKRFGE
EMRPVKLTTKVFGYAPARNDFLFERRLQSFIYDILMQHSRGKSALVFCSTRKGAQEAAQC
LSQTASSLGYSNPFMKSMQQYEHLKEAALTCSDKQLQACIVHGVGYHNGGLCLKDRSVVE
GLFLKGDLQILCTTNTLAHGINLPAHTVVIKSTQFFNKEKGLYVEYERSMVLQMCGRAGR
PPFDDTGTIIIMTRRETVHLYENLLNGCEMVESQLLPCAVEHLNAEIVQLTVSDITLAIE
WLKCSYLYIRIKKNPQHYGIKKEIPRELLEKQMKDICVEKIHELGEYGLIWTDEDGFLLK
PLEPGKLMTKFYLKFDTMKLIVKASACCTLEDLLHIICHSAEITWIQLRRNEKKLLNDIN
TDKEGRLRFHVVCANGKRKKRIQMREEKIFILVNDCLTGDPLVHDLSLNQETNSICSNGC
RVAKCMREYFIYKKNYKSAINSMLLAKCLHQKLWESSSFLLKQLPGIGIVTAKALKTAGI
DSFESLATAEARKIESVTGRNYPFGYSIKSSLSSLSPKIDMNIEDAGNRQGKSTIIVTLS
RLSQAVQSSKQNYADMVVGSEEDNMILFHEKIKTQDFSSPYSVKLYVSCPPNARVTLKVD
LIFEEYVGLDIHKKHVVSREDLQATKVFGIKKAEFLHNLPAESCLVSSRTTRTNQSQYHN
GQSPLSKEVYVIEDDAMANAPDKAYNDVDILGTREYNNLASMEVPSFTLLPEEDYEDIQD
ELVSEPREAECKSATNNTIFEHIRKKSRDFPALLLSKSMDSSYEPLILKKMKTSGDQFGL
DKSSLHADDEVMPMVSDRTEARVSPTNTAERCRNILSSSAEKSSFRFTGKPGSLSQLNRT
QDKNSTQLAGKRENPSEKSKALSRIQDESPLQFAGKRDSSSVPLNKTPDENSLQFLGKMD
SSSEKCKSCFRSPLADFQSMQCTKQVAASVQPLRIQDYCKDILASAKGSGTGASFLGVKS
VFSFL
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatgggacatctcggcgacccgtacgcgctgcactccgtcgccgaccttccc
ccgccgttccgctccgctttcgggttcaggtatttcaattccttgcagagcgagtgcttc
cctgcgtgcttcctctcggatgtaaacatggttatctctgcgcctaccgggagtggaaag
accgtgctgtttgagctctgcattatgaggcttctctcaaggttcctctcgtcagattgg
aggtttaatttgatcaaaggaaccttgaaaacaatctacatcgctccaatgaaggcattg
gtgcaggagaagttgcgtgactggaacatgaagttgggctcgttgggaatcaattgcttg
gagatcactggtgacaatgacttctataacatcaaatccatacatgacgctgatttaatt
ctcacaactcctgagaagtttgattctgtgagtcgtcatggaataagagatggtggactg
ggtttcttcagtgacattgctttgattcttattgatgaagttcatcttctcaacgatccc
cgtggagcggccttagaagcaattgtcagtagaataaaaatgctttctcgacttggcaca
atgaaatctgcccctttggcaaatgttcgattcgtagcagtttctgctactatccctaat
attgaggatatagcggagtggctggaagtaccttctgaaggaataaaaagatttggagaa
gagatgaggccagtgaaattgacaaccaaggtttttggctacgctccagcaagaaatgac
ttcctatttgagaggaggctccaaagtttcatttatgatatactgatgcaacattcaaga
ggaaagtctgcacttgttttctgttctactagaaaaggcgcacaagaagcagcacagtgc
ctttcacaaactgcaagttcactgggatattcaaatccatttatgaaatcgatgcagcag
tatgaacatctaaaggaggcagccctaacctgtagtgacaagcagttgcaggcttgtatc
gtacatggagttggttatcacaacggtggtctttgcctaaaggataggagtgttgttgag
ggactattcctgaagggtgatcttcaaatactttgcacgacgaatactttggcacatggt
atcaatttacctgcacacacagtggtgataaagtcaacacaatttttcaacaaagagaag
ggcctctatgtagaatatgagagatccatggttcttcagatgtgtgggagggctgggcgc
ccaccatttgatgatactggaacaattataatcatgacaagaagagagacagtgcatctg
tatgagaaccttctaaatggatgtgaaatggtggagtctcagttacttccatgtgcggtt
gagcatctaaatgcagagattgttcagttgacggtgtctgatataactttggctattgag
tggctcaagtgttcgtatttgtacataaggataaagaagaatcctcagcattacggaatt
aagaaagagattccacgtgaacttcttgaaaagcaaatgaaagatatatgtgttgagaag
atccatgagctgggggagtatgggctaatttggacagatgaagatggtttccttctaaaa
ccattagaacctgggaagctgatgacaaaattctatctgaaatttgatacgatgaagctt
attgtcaaagcttctgcctgttgcactttagaagatcttttgcatatcatctgtcactct
gcagagattacttggatccaactacgccgaaatgagaagaagctccttaatgacataaat
actgacaaagagggaaggcttcggttccatgttgtttgtgcaaacggaaaaaggaagaag
cgtattcaaatgagagaagaaaaaatatttatactggtaaatgactgtttaactggggac
cctctagtccatgatttatccctcaaccaggaaacaaattcaatatgctcaaatggatgc
agagttgccaaatgcatgagagaatatttcatatacaaaaagaattacaaatctgccata
aattctatgctccttgcgaaatgcttgcaccaaaaactttgggagagcagttcatttttg
ctgaagcaattgcctggaattggaattgtcacagcaaaggcactgaagactgctggaatt
gattcttttgagagtttggcaactgctgaagctaggaagatagaatccgtaacaggacgc
aattatccattcggatatagtataaaaagttccctatcatcattaagccccaaaattgac
atgaacatagaggatgctggaaacagacagggaaagtcaacaattatagtaacactgtct
cgcctgtcacaggcagttcaatccagtaaacagaattatgctgatatggttgtgggctca
gaggaagataatatgatccttttccatgagaaaataaagactcaagatttttccagtcca
tactctgtgaaactgtatgtgtcatgccccccaaatgccagggtgactctgaaggttgac
ctcatttttgaagaatacgttggtcttgatatacacaagaagcatgtggtcagcagggaa
gatttgcaagcaaccaaagtgtttgggattaaaaaggcagaattcttgcacaatctgcct
gcagagagttgtttggttagctctagaacaactcgaacaaaccaatctcagtatcataat
ggacagagcccactttctaaagaggtatatgttatagaagatgatgctatggccaatgct
ccagataaagcttataatgatgtggacattctgggaacaagagagtacaacaacttagct
tcaatggaggtcccaagctttactctactgcctgaagaagattatgaagatattcaagat
gaattggtttctgaaccaagagaggcagaatgcaaaagtgccaccaacaatacaattttt
gaacacattcgcaagaaatccagagatttccccgctctgttgttgtcgaaatccatggat
agctcttatgaacctttgatacttaagaaaatgaagacatcaggcgatcagtttggactg
gataagagcagtctgcatgcagatgatgaggtcatgcctatggtatctgatcgtactgag
gctagagtctctccaaccaatacagctgagaggtgtcgcaacatcctgagcagcagtgca
gaaaagagctcctttcggtttacaggaaaaccggggagtctatctcagctgaacagaact
caagacaaaaactctactcaacttgcaggtaaaagagaaaacccatctgagaagagcaaa
gccctaagcaggatccaagatgagagccctcttcaatttgcaggtaaaagggatagctca
tctgttcccctaaacaagactccagatgagaattctcttcaatttttaggtaaaatggac
agctcatctgagaagtgcaaatcctgcttcagaagtccactcgcagatttccagtccatg
caatgtacaaagcaagtcgcagcctcagtccaacctctcaggattcaggattattgcaag
gatatattagcaagtgcaaagggcagtgggactggtgcatcttttcttggcgtcaagagt
gtcttctcatttctctga
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