Oryza brachyantha (malo sina): 102711789
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Entry
102711789 CDS
T02995
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00730
Thiamine metabolism
obr01100
Metabolic pathways
obr01240
Biosynthesis of cofactors
Module
obr_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
102711789
Enzymes [BR:
obr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
102711789
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
PTE
Motif
Other DBs
NCBI-GeneID:
102711789
NCBI-ProteinID:
XP_006650406
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Position
3:21942885..21948055
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AA seq
652 aa
AA seq
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MASCLAVASEIQKMAALQPSFSSAMAMKNLKFPKTALLPCFGSIARPQDVQDRNANFNCS
RPKAASVTDHSTAEPAKPRQSKHTVDPAAPEFLPLPSFEECFPRSTKESREIVHEESGHV
LKVPFRRIHLTGDEKHFDTYDTSGPQNISPRTGLPKIRKEWIDRREKLGGPRYTQMYYAK
QGIITEEMLYCATRENLSPEFVRSEVARGRAIIPSNKRHLELEPMIVGRNFLVKVNANIG
NSAVVSSIEEEVHKLQWATMWGADTVMDLSTGRHIHETREWILRNSSVPIGTVPIYQALE
KVNGIAENLSWEIFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAK
WCLTYHKENFAYEHWDEILDICNQYDVSLSIGDGLRPGSIYDANDSAQFAELLTQGELTR
RAWAKDVQVMNEGPGHIPMHKIPENMEKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIG
AANIGALGTALLCYVTPKEHLGLPNRDDVKTGVISYKIAAHAADLAKGHPYAQAWDDTLS
KARFEFRWLDQFALSLDPVTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDIRKYA
DEHGYGTVEEAVIEGMNAMSAEFLAARKTISGEQHGEAGGEIYVPESYTARK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctgcttggcggtagcatcggagatacagaaaatggctgcactgcaaccctca
ttctcatcagcaatggctatgaaaaatctgaagttccccaaaactgcacttttaccttgc
tttggtagtattgcacgtcctcaagatgtgcaggacaggaatgctaacttcaattgttca
aggcctaaagcagcttcagtgactgaccattcaacagcagagccagcaaaacccaggcaa
agcaagcacactgttgatcctgcagctccagagtttctgccactcccatcatttgaagaa
tgctttccaaggagcacaaaagaatccagggaaattgtgcatgaggaatctggtcatgtc
ctcaaggtcccgtttaggagaatccatttgactggagatgagaagcattttgacacatat
gacaccagcggtcctcaaaacattagcccacggactggacttccaaagataagaaaggaa
tggattgacaggagggagaagttaggtggtcctcgatacacacaaatgtattatgctaag
cagggaatcataacagaggagatgctatactgtgccacacgtgagaaccttagtcctgaa
ttcgtccggtcagaggttgctcgtggacgagctataattccttccaacaagaggcacctg
gaattggaaccaatgattgttggacggaatttccttgtaaaagtgaacgcaaacattggg
aactcagctgttgtgagctccattgaggaggaagttcacaaactccagtgggctacaatg
tggggagctgatactgtcatggacctttcaacagggcgtcatatccacgagacccgggaa
tggatccttcgcaattcttcagttcctattgggacggttcctatttaccaagcacttgag
aaagttaatggtattgctgaaaatctgagctgggaaatctttagagatactctaattgaa
caagctgagcagggtgttgattacttcacaatccatgctggtgtactccttcgttacatt
cctcttacagcaaagagaatgactggcatagtttcacgtggtggttctatccatgcaaaa
tggtgcctaacatatcataaggagaactttgcctatgaacactgggatgaaattcttgac
atttgcaatcagtatgatgtttcattatccattggtgatggtttgaggccaggttctatt
tatgatgcaaatgatagtgctcagtttgcagaattgctgactcaaggggaactcacacgc
cgagcttgggcgaaagacgtgcaggtgatgaatgaaggtccagggcacattccgatgcat
aaaattcctgaaaacatggagaagcaactggagtggtgcaatgaagcacctttctacaca
ctgggcccactgacaactgatattgcacctggttatgatcacatcacctcagccattggt
gctgccaacattggggctcttggcactgcacttctttgttatgtaacaccaaaggagcac
cttggattgcccaaccgtgatgatgttaagacaggcgtgatatcctataaaattgctgct
catgctgctgatttggcaaagggccatccctatgcacaagcatgggatgatacactaagc
aaggcgagatttgagtttagatggttggatcaatttgctttatctctggatcctgtaacc
gccatgtcttttcatgatgaaacattaccatctgagggtgccaaagtagcacatttctgc
tcaatgtgtggcccaaagttttgttcaatgaaaatcacagaggatattagaaaatatgct
gatgaacatggttatgggacagtggaagaagctgtaatagagggaatgaatgctatgagt
gctgagtttttggctgcaaggaaaacaatcagtggggaacaacatggtgaagctggaggg
gagatctatgttccagaaagctatacagctcgcaaataa
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