Oryza brachyantha (malo sina): 102711806
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Entry
102711806 CDS
T02995
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102711806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102711806
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102711806
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GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
LRR_Zer-1
LRR_8
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
102711806
NCBI-ProteinID:
XP_006654426
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Position
5:13550530..13555598
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AA seq
380 aa
AA seq
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MVSARPVNGELDAWFRSLMLSIGNGRGEAESGGAMPTLSGWKDLPVELLLRIMSIVGDDR
MVVAASGVCTGWRDALGWGLTNLSLSRCRQNMNNLMISLAYKFTKLQVLTLRQNIAQLED
TAVEAVATYCHDLRELDLSRSFRLSDRSLYALAHGCPQLTKLNISGCSNFSDIALTYLTC
HCKNLKCLNLCGCGKAATDRALQAIAHNCGQLQSLSLGWCEDVTDKGVTSLASGCPDLRA
LDLCGCVLITDESVIALATGCPHLRSLGLYYCQNITDRAMYSLANSRVKSKRRRWDAARS
SSSGTSSKEEDGLANLNISQCTALTPPAVQAVCDSFPALHTCPDRHSLIISGCLSLTSVH
CACALHPHRAGRAMVPSHAY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggttagtgcgaggccagtaaatggagaattggatgcatggttcagaagcctcatgctt
tctattggcaatgggaggggagaggctgaaagtggtggtgcaatgccaaccttgtcaggc
tggaaggaccttcctgttgagctgctgctgcggattatgtcaatagttggagatgaccgg
atggttgttgcggcatctggtgtttgcactggttggcgtgacgcactgggatgggggctt
actaatctttccctctcacggtgtcgtcagaacatgaataacttaatgatatcacttgct
tacaaattcacaaagcttcaagttcttactcttcgacagaacatagctcagcttgaagac
actgcagttgaggcagttgccacctactgtcatgatctacgtgagttagaccttagcaga
agttttaggcttagtgaccgttccttgtatgcattagctcatggctgtccacagcttaca
aaactaaacattagtggatgttccaacttcagtgacattgccttgacctatcttacttgc
cactgtaaaaatcttaagtgcttgaatctatgtggttgtgggaaggcagcaacagacaga
gctttgcaggccatagctcataattgcggccagcttcaatcattgagcttaggttggtgt
gaggatgtcactgataagggagtgaccagcttggcgtcggggtgccctgatctcagggct
ctggacttgtgcggttgtgttcttataacagatgagagtgtgatcgctcttgccactggg
tgtccacacctgcgatctttaggcttgtactactgccagaacatcaccgaccgagccatg
tactccctcgcaaacagccgggtcaagagcaaacgcaggaggtgggatgccgcgaggagc
agcagcagcggcacctctagcaaggaagaagacggcctcgcgaacctgaacatcagccag
tgcacggccctgacaccccccgccgtgcaggcggtctgcgactccttcccggcgctccac
acctgtcctgacaggcactccctgatcatcagcggctgcctcagcctgacgtccgtccac
tgtgcctgcgccctccacccgcaccgggctggaagagccatggtgcctagccacgcatac
tga
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