Oryza brachyantha (malo sina): 102711855
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Entry
102711855 CDS
T02995
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102711855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obr03009
]
102711855
Ribosome biogenesis [BR:
obr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102711855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
PROPPIN
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
102711855
NCBI-ProteinID:
XP_006664731
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Position
12:15545668..15552492
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AA seq
800 aa
AA seq
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MFTGGQSYVSAPPAFSADGRLLLVCTGRTVSVFSASTCMLVSELEGHEGDVTAVVLAPSP
AGAAAAKLARYCWTAGLDGALIYWDFAAAELVRKVQVGLPVHSMAIPNITRGSKGVDIYT
PFAFVSVEDTSKPSNETKALRGQLKIVDLTKGREVGSLLAETRKPEKIVASSSGEFLGIP
NKTKLHVWRIPLKDFKPDKIRKIKLHHTKKLNTLAFHPSERIVAGGDVTGRISIWRGFGN
AKFSGSHGARSNEDEDRNDVRGNSDADSCTTWHWHSGGVKFLKFSTDGAYLFSGGMEGVI
VVWQLDTGKRRYKPRLGSPLLSFVDSPDSSIACVSCMNNQVHLLKMPNMEVMRSIAGIKL
PISSLSLDGCYRGLYGFDYSNKLVAVPTEDYCIQFYDLFENTEVSEVQVCERNFQPVDDI
TMYISLVSLSIDGNFMCTVDVKLPEEELGGLITLKFWNQGSRAGEYFLSTVIYEPHSDAG
ISAIAFRPGKNMAVSTSLGGNFKVWVQSMLSQPSDEKEQSGWRCQSVGSYRNKPMTAATF
SSDGSVLAVAAESVITLWDPDNNALVGVIAEALSPITKLSFVGTSQFLMSISQSSKPQVA
VWNVPNLSMQWSYSLFAEAACCSSSGSEFAVLGLLSCPDGGTLAEQDGVILLFDAENLKP
VSSWSVKKARGGSVAFLKGDSSLDANTKDMIDGEASLLVYINGSHEYVIFDPRSNEELHI
GKSAHRNIQTEELAPIGYASIFGELPKLESKKDVPEIPFIPSERPWETIFNGSSHVLPPL
TKLCPAFLASLLEKRPVANE
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccggcggccagagctacgtctccgcgccgccggccttctccgccgacgggcgg
ctcctcctcgtctgcacgggccgcaccgtctccgtcttcagcgcctccacctgcatgctg
gtgtcggagctggaggggcacgagggggacgtcacggcggtggtgctggcgccgtcgccg
gcgggggcggcggcggccaagctcgcgagatactgctggacggcggggcttgatggggcg
ctgatttactgggacttcgcggcggcggagctggtgcggaaggtccaggtcggcctcccc
gtgcactccatggccattcctaacataaccagaggatcgaaaggagttgacatttacaca
ccgtttgcattcgtctcggtggaggacacaagtaagccatctaatgagacgaaagcattg
cgcgggcagttgaaaatcgttgacttaaccaaagggcgtgaagtgggtagtcttctggct
gagactcgtaaaccagaaaagattgttgcaagtagctctggtgaatttttgggcattcca
aataagacaaagctccatgtatggaggataccattgaaagatttcaagcctgacaaaata
aggaagataaagcttcaccacacaaaaaaattgaatacgctggcctttcatccaagtgag
agaattgtggctggtggtgatgtaactggtagaatatcgatctggagaggttttggaaat
gcaaaattttctggatcacacggtgcaagatctaatgaagatgaagacaggaatgatgtg
aggggtaacagtgatgcagattcttgcaccacatggcattggcattcaggcggagtgaag
tttctcaaattttctactgatggggcttacttgttctcaggtggtatggagggggttatt
gttgtatggcaactagatactggaaagagaaggtataaaccacgtctagggtctcctctt
ttgtcctttgtagattctccggactcttccattgcctgtgtgtcatgtatgaataaccaa
gtccatcttcttaaaatgcccaatatggaggtcatgagatctattgctggaattaagcta
cctatctcttccctgagcttggatggatgttatcgaggattgtatggatttgattacagt
aacaaacttgttgctgtgccaacagaagattattgcatacagttctacgatttgtttgag
aacaccgaagtttctgaggttcaagtttgtgagaggaactttcagcctgttgatgatatc
acaatgtatatttctttagtttcactgtccatcgatggtaattttatgtgcaccgttgat
gtcaagcttcctgaagaagaattaggtggacttattacactgaaattttggaaccaaggg
tcgcgtgctggagaatattttttgtctactgtcatttatgagccacacagtgatgctgga
atatctgctattgctttccgccctggcaaaaacatggctgtgagcacttctttaggtggc
aacttcaaggtttgggttcaaagtatgctttcacaaccaagtgatgaaaaagaacaatct
ggttggagatgccaatcagtcggctcatacaggaataaacctatgacagcagcaactttc
tcaagcgatggatctgttcttgcggttgcagctgagagtgttatcacattgtgggatcct
gataataacgcgcttgttggtgtgattgcagaggcactatcgcccatcacaaaactttca
tttgttgggacatcacagtttttgatgtctatatctcagagctccaaaccacaggttgct
gtgtggaatgttccaaatctttccatgcaatggtcttacagcctctttgctgaagctgca
tgttgttcgtcaagtggaagtgagtttgcagttcttggtcttctaagttgtcctgatgga
ggaacactggctgagcaagatggagtgatactacttttcgatgctgaaaatttgaagcct
gtatcttcctggtcagtaaagaaggcaaggggaggcagtgttgcttttttgaagggcgat
tcctctttggatgcaaacaccaaagacatgatagatggagaggcatcattgctggtttat
ataaatggttctcatgaatatgttatatttgatccccgaagcaatgaggagttgcacatt
ggcaagagcgcacacagaaatattcaaactgaggaacttgcaccaattggttatgcttct
atttttggagaacttccaaaactggagtcaaagaaagatgttccagaaattccatttatc
ccgtcagagagaccttgggagactatattcaatggatcatctcatgttcttccacctctc
acaaaattatgtcctgctttcttggcatcattgcttgagaagcgaccagttgcaaatgag
tga
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