Oryza brachyantha (malo sina): 102711955
Help
Entry
102711955 CDS
T02995
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obr04131
]
102711955
04121 Ubiquitin system [BR:
obr04121
]
102711955
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102711955
Membrane trafficking [BR:
obr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102711955
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102711955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
DUF7129
Zn_ribbon_6
DUF7410
zf-Nse
HypA
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
102711955
NCBI-ProteinID:
XP_006650082
UniProt:
J3LNS6
LinkDB
All DBs
Position
3:complement(11482745..11484616)
Genome browser
AA seq
282 aa
AA seq
DB search
MSGGRQSYWCYQCRQRVNPRGRRMECPYCDSGFVSEMDDVEALMSHFVGMDPDFHRDPRF
GIMEAISAVMRHGMAGANREVDVRGRPNIFPDLEMEFGSGPWLLFRGQIPGHLSEDNGFD
VFINGRRGVGMRRANIADYFVGPGLDDLIEQLTQNDRQGPPPATQSSIDAMPTVKITQRH
LTGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELPPQSTAGAS
CSRTRSTNQSQTSSSNGRSSVGRQRRRNPFSFLWPFRSSSSR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaggtaggcaatcgtattggtgctaccaatgtagacagcgggtgaatccgcgt
ggccggaggatggagtgtccctattgtgattcaggttttgtatctgaaatggatgatgtg
gaggctcttatgagccactttgttgggatggatcctgatttccatcgcgacccaaggttc
gggatcatggaggcgatctctgcggtgatgagacatggcatggcaggagcgaatcgggaa
gtcgatgtgagaggcaggccaaacatatttcccgacctggagatggagtttggatcaggg
ccatggctgctcttccgtggccagatccctggtcatctctcagaagacaatggttttgat
gtgttcatcaacggacgtcgtggcgttggcatgcggagggcaaacattgcagactacttt
gttggacctggactggatgatcttattgagcaattgactcagaatgaccggcaaggtccg
ccgcccgccactcagtcctccattgatgccatgccaactgtgaagatcacacagcggcat
cttaccggagactcgcattgccctgtctgcaaggacaagtttgagctggggtctgaggca
agggagatgccatgcaagcatctgtaccactctgactgcatagttccttggctggaacag
cataactcctgccccgtttgccggtacgagttgccaccacagagcactgctggtgctagc
tgctcacgcacaagatcaaccaaccaaagccaaacttcaagtagcaatgggagaagcagt
gttggacgtcaaaggagaaggaatccgttctcattcctatggcctttccgatcatcgagc
tctcgttag
DBGET
integrated database retrieval system
