Oryza brachyantha (malo sina): 102712024
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Entry
102712024 CDS
T02995
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102712024
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
obr01002
]
102712024
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obr04131
]
102712024
04121 Ubiquitin system [BR:
obr04121
]
102712024
Enzymes [BR:
obr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102712024
Peptidases and inhibitors [BR:
obr01002
]
Metallo peptidases
Family M67
102712024
Membrane trafficking [BR:
obr04131
]
Endosome - Lysosome transport
Others
Others
102712024
Ubiquitin system [BR:
obr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
102712024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
102712024
NCBI-ProteinID:
XP_006644144
UniProt:
J3KZI5
LinkDB
All DBs
Position
1:9888728..9895095
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AA seq
519 aa
AA seq
DB search
MGPPPQPAKGGSIDIQASARPIAVDHRIKLPYYFRIAGNLLRQAKIYRDEKNLVDLYVIL
LRYSSLICETIPKHRDYPTFKLREVDFFRLAPHNQSKLIEVLSELESLKPVVQRQVAEHN
RARGGAIQSNSSINRTVAVNNISQQHMATPYTYQPFVGSNNGSLQRFVPGGNHEVAPIMS
AQPDRRTHKQFVNLPFPKEETLARHSILGPNGLHGQWTGPVTAIKVQYPSNLDLIKSDVS
SLLPVVLNQDDQNGLSTISTDSTQVENDDMKSVLSLDDGRWSKPAEEHTSVPSAILEEEL
SQLSIRQPSPPPVLAELERKPIAPSEVADPTPGLATSETRGYQSLHVPVKLMECFLRVAE
ANTKRSLETCGVLAGTLKKRTFYITALIIPKQKSTSDSCEATNEDELFDVQDKGSLFTLG
WIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDTRRKHGIFHLTDPGGMGVIHD
CPERGFHPHKAPLDGSPIYEHCSHVYMNSDVKFDVIDLR
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggggccgccgccacagccggccaagggaggcagcatcgacatccaggcgtccgcgcgg
ccgatcgccgtcgaccaccgcatcaagctcccctactacttccgcatcgccggcaacctc
ctccgccaggctaagatataccgagacgagaagaatctcgtcgacctgtatgtcatcctc
ctgcgatactcgagcttgatttgcgagacgattccgaagcatcgtgactaccctacattc
aagttgagagaagtggatttcttcagacttgctccgcataaccaatctaaactcattgaa
gtgctcagtgaacttgagtcactgaagccagttgtgcagcggcaagttgctgagcataac
agagcaagaggaggtgccatccaatctaatagcagtataaatagaaccgtggctgtaaat
aatatatcacagcagcacatggcaaccccatatacctatcagccatttgtaggaagtaac
aatggatcattacaaagatttgtccctggtgggaatcatgaagtggcaccgataatgagt
gctcaacctgataggcggacccacaaacaatttgtaaatctacctttccctaaagaggaa
acattagctagacattctatattgggacctaatgggcttcatgggcaatggactgggcct
gttactgcaatcaaggttcagtatccaagcaatcttgatctaataaaaagcgatgtctct
agtttattgccagttgtcttgaaccaagatgatcagaatggtctcagtacaatatccaca
gatagcactcaagttgagaatgatgatatgaaatctgttttgtctcttgatgatggtcga
tggtccaaaccggcagaagaacacacctctgtaccttctgctattctggaagaagagttg
tcccaattgagtatcagacagccttcacctcctccggtcttggcagagttagagcgcaag
ccaattgctccatcggaagttgctgatccaacaccaggacttgctacctcagaaaccagg
ggttatcagagcttacatgttccggtaaagttgatggagtgttttctaagggttgctgag
gcaaatactaagagaagtttagaaacttgtggggttcttgctggtaccctgaaaaaaaga
accttttacattactgcgttaataattccaaagcagaaatctacatctgattcatgtgaa
gcgacaaatgaagatgaattatttgatgttcaggacaagggctcgcttttcactcttggt
tggattcacacacatccaacacagtcctgcttcctgtcctccattgatctccataaccat
tattcttatcaggtgatgttacctgaagcaattgcaatagttatggcacctactgacaca
aggagaaaacatggtatatttcatctcactgatcctggtggtatgggcgtgatccatgat
tgtccggagagaggattccatccgcataaggcgcctctagatggctcaccaatatatgag
cattgctcccatgtgtatatgaactccgatgtaaagtttgatgtgatcgaccttcgatga
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