Oryza brachyantha (malo sina): 102712109
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Entry
102712109 CDS
T02995
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obr03009
]
102712109
Ribosome biogenesis [BR:
obr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
102712109
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
AAA_14
AAA_23
MMR_HSR1
RsgA_GTPase
AAA_27
AAA_28
AAA_22
AAA_24
Ig_F54D1_6_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
102712109
NCBI-ProteinID:
XP_006661013
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All DBs
Position
9:complement(15432009..15436272)
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AA seq
586 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKASSSSSVKAADDLATISLSKRTCTAVLTSHPLSRDI
HIESLSLTFHGHDLLVDTDLELNYGRRYGLLGLNGCGKSCLLKAIGCRELPIPHHMDIYH
LTHEIEASDMSALEAVISCDEERLQLEKEAEILAAQDDGGGEALDRVYERLEAIDASTAE
KRAAEILFGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACV
WLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQNRKLKLYTGNYDQYVQTRAELEENQM
KQYRWEQDQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDKVLTFRF
TDVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGD
LIPLDGMVRRHNHLRIAQFHQHLAEKLDLDMSALQYMMKEYPGNEEERMRAAIGKFGLSG
KAQVMPMRNLSDGQRSRVIFAWLAWREPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLV
LVSHDFRLINQVAQEIWVCEKQAVTRWEGDIMGFKEHLRSKAGLED
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgacgctagcaagaagaaggcggcgcagaaaaaggctgccgccgccgccaag
agagggggcaaggcctcctcctcctcctccgtcaaggccgccgatgacctcgccaccatc
agcctctccaagcgcacctgcaccgccgtcctcacctcccatcccctctcccgcgacatc
cacatcgagtccctctcgctcacattccacggccatgacctgcttgttgataccgacctg
gagctcaactacgggaggcgatacggcttgcttggcttaaacggctgtggaaaatcctgc
cttctcaaagctataggatgccgggagcttcctatccctcaccatatggacatctatcac
cttacccatgagatcgaggcttccgacatgtctgcgctagaggcagtcatcagctgtgac
gaagaaaggctccagctcgagaaggaagctgaaatcttagccgctcaagatgatggtggt
ggcgaagctctggatcgcgtgtatgagcgcttagaagccattgatgcctccaccgccgaa
aagcgtgctgccgagattttgtttggcttgggttttaacaagcagatgcaagcaaagaaa
acccgcgatttctctggcggttggcgcatgaggattgctttggctagggcactcttcatg
aatccaactatccttttgctcgacgagcctaccaatcatctagatcttgaggcctgtgtc
tggctggaagaaaccttgaaaaaatttgaccgtatacttgttgtcatatcacactcccag
gacttcttaaatggagtatgtacaaacatcatccatatgcagaacaggaagctcaagcta
tacactggtaactatgaccagtatgtccaaacacgagccgagcttgaagaaaatcaaatg
aagcagtacagatgggagcaggaccagattgcctcgatgaaggagtacatcgcacggttt
ggtcatggatctgccaagctggcccgtcaggctcaaagtaaagagaaaactcttgctaag
atggagcgtggggggctcacagagaaggttgtgagggataaggtactgacattccgcttc
actgatgttggcaagctgccacctccagtgctgcagtttgtggaggtcacatttgggtac
acaccagacaacctcatctacaagaaccttgattttggtgttgaccttgactcaagggtg
gcactggttggtcctaacggagctgggaagagcacactgcttaagctcatgacaggtgat
ctcataccactggatggcatggtgaggcggcacaaccatctcaggattgcacaattccac
cagcacctagcagagaagctggacctggacatgtcagctctgcagtacatgatgaaggaa
tacccagggaatgaggaggagaggatgagggcagcgatcggcaaatttgggttgtcaggg
aaggcacaggtgatgccgatgaggaacctgtcagacgggcagaggagccgggtaatattc
gcgtggctggcgtggagagaaccgcacatgctgttgctggatgagccaacgaaccatctg
gacattgagacaatcgactctctggcagaggcgctgaatgagtgggatggagggctggtg
ctggtgagccatgactttaggctgatcaaccaggtggcacaggagatctgggtgtgcgaa
aagcaggcagtgaccaggtgggaaggtgacattatggggttcaaggagcacctgaggagc
aaggccggactggaggattga
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