Oryza brachyantha (malo sina): 102712246
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Entry
102712246 CDS
T02995
Name
(RefSeq) heat stress transcription factor A-1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obr03000
]
102712246
Transcription factors [BR:
obr03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
102712246
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
CENP-F_leu_zip
TMF_TATA_bd
Exonuc_VII_L
AFAP_C
APG6_N
ENOX1
Motif
Other DBs
NCBI-GeneID:
102712246
NCBI-ProteinID:
XP_006652039
LinkDB
All DBs
Position
3:29535636..29540152
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AA seq
503 aa
AA seq
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MEAAAAAAGTVTMAVAPPAAAAAVSNGVSAAPPPFLMKTYEMVDDPATDAVVSWGPGNNS
FVVWNTPEFARDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKT
INRRKPTHGNSQVQQPQLPTAPVPACVEVGKFGMEEEIEMLKRDKNVLMQELVRLRQQQQ
TTDHQLQTLGKRLQGMEQRQQQMMSFLAKAMHSPGFLAQFVQQNENNRRRIVASNKKRRL
PKQDGSLDSESASLDGQIVKYQPMINEAAKAMLRKILKLDPSHRFESMGNSDNFLLENYM
PTGQGFDSSSSTRNSGVTLAEVPTNSGLPYVATSSGLSAICSSSTPQIQCPVVLDSGISK
ELPNMSAVPSVPKAVAPGPSDIKIPEFPDLQDIVTGENVNMPGGGFEMPGPEGVFPLPEE
GDDSVPIETDEIFYNDDTQKLPAIIDSFWEQFLVASPLSVDNDEVDSGVLDQKETLQENG
WTKAENMANLTEQMGLLSSNHIV
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcggccgcggcggcggggacggtcaccatggcggtcgcgcctccggctgcg
gctgcggcggtcagcaacggggtcagcgctgcgccgccgcccttcctgatgaagacgtac
gagatggtggacgacccggccaccgacgccgtcgtctcctggggccccggcaacaacagc
ttcgttgtctggaacacgcccgagttcgcccgcgacctcctccccaagtacttcaagcac
agcaacttctcctccttcgtccgtcagctcaacacctacggatttaggaaagttgatcca
gataggtgggagtttgcaaacgagggttttctgagaggacaaaaacatctactgaagacc
attaacagaaggaaaccaactcatgggaatagccaagtgcagcagccccagttgccaact
gctcctgtacctgcttgtgtagaagtggggaagtttgggatggaagaagagattgaaatg
cttaaaagggataaaaatgttttaatgcaggagcttgtcaggctgagacagcaacagcag
acaaccgatcatcagctgcagactttgggcaagcgtctacaaggtatggagcaacgtcaa
caacaaatgatgtctttcctggctaaagcaatgcatagtcctggcttcctagcacaattt
gtacagcagaacgaaaacaacagaagaagaatagttgctagtaacaagaaaaggaggtta
ccaaagcaagatggctcccttgactctgaaagtgcttcattggatgggcaaatagtaaag
tatcaacctatgatcaatgaagcagccaaagcaatgctcaggaagatcctaaagctagat
ccttcacataggtttgaatccatgggcaattcagataatttcctactcgagaattatatg
ccaaccggtcaaggttttgacagctcttcatcaactaggaattctggtgtcacccttgca
gaggtcccaactaactcaggtttgccatatgtagctacaagctctggactttcagctatt
tgttcatcttcaactccgcagattcagtgcccggttgttttggacagtggcatatccaaa
gaacttccgaacatgagtgcggtaccttctgttccaaaggctgtggctccaggtccaagt
gatatcaaaattccggaattcccagatttgcaagatatagtaactggagaaaatgttaat
atgcctggagggggctttgaaatgcctggtcctgagggtgtattccctttgcctgaagaa
ggtgatgatagtgttcccattgagactgatgagattttctacaatgatgacacccagaaa
cttcctgctatcatcgattctttctgggaacagttcctggtggctagtcctctatctgtt
gataatgatgaagtcgattcaggtgtactagaccagaaggaaacactacaggagaatgga
tggaccaaagctgaaaacatggctaaccttacagaacaaatgggcctcctgtcgtcaaac
catatagtctga
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