Oryza brachyantha (malo sina): 102712392
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Entry
102712392 CDS
T02995
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obr03000
]
102712392
03036 Chromosome and associated proteins [BR:
obr03036
]
102712392
Transcription factors [BR:
obr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
102712392
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
102712392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
102712392
NCBI-ProteinID:
XP_006661831
UniProt:
J3N360
LinkDB
All DBs
Position
10:11181417..11194981
Genome browser
AA seq
1480 aa
AA seq
DB search
MYENRKLSDDMSKKTESIHSNGQAQEDKATIIEPESDATNFEVETETAHGVCEVHKVHGH
GTMENGLHEEASTADDDSESNSYEYLLQESDNEQSSESDAGEGDNEAPLTEEEVEALVTE
FLDVESKAAQAQESLEKESLDKIEAEVRLELSERLQGDELELAVSTEMKQYKEEWESELD
DLETHIAVLLEQLDAAGIELPSLYKSIESQVPNVCETEVWKNMTHWAGSQVPEEANQSIR
KADEYLQSCRPVRRKHGKLLEEGASGFLAGKIPVEDDGSVKCHEKSWNVFNELTKSQEYA
EHTFGSSNWASVYLASTPQEAAALGLQFPGVDEVEEIAEVEGAVGDIKCVDEIELSEEQR
RKYRKVAEEDDAKITKRLRRHLKERRTRHRYKGDFGLASPSNGCCELPPEKPKTDENGIS
VELAKRAREDDVELNHKRSKTVIIESDEDMETESKPASAPSENVSKIIDLDSPKLGDKVW
PKAFKCTICTEMLNAPEVHRHPVLDVIVCGSCRFLVIERNRLEDPVSGGYCTWCVQSEQL
QSCSSCKLLFCRNCLSKNFGEEGLSEAKVTGWQCCCCLPSQLEHLISECDKALSGVESSD
PESDFADLSVIESNGPFSKGKMKKRIRRIMGDEELGEETKRKIAMEKARQEHLKSMQEQS
ASKSASKLKSNSIGTSFEAPTEVSLEYVEDGHIVNVAREEDEAPVRIPSSISAKLKPHQV
SGIRFLWENVIQSVKKVKSGDKGFGCILAHNMGLGKTFQVITFLYTVMRCTQLGLRTVLI
VTPVNVLHNWKKEFIKWRPTELKPLRVYMLEDVARANILYLLKKWQAKGGVLLIGYSAFR
NLSLGRSARDKTVANEITNALQGGPDILVCDEAHIIKNRRADTTQALKQVKTQRRIALTG
SPLQNNLMEYYCMVDFVREGYLGSSHEFRNRFQNPIENGQHTNSTSDDVKIMNQRSHILY
EQLKGFVQRMDMNVVKNDLPPKKVFVVTVKLSQLQRKLYRRFLDVNGFSSSAASEKSFQR
SCFFAKYQTLALIWNHPGLLQMAKEQKGNLRQEDVESFLMDESSSDDNIENYLPNGEKLR
SRNDQPSKKTSDVVNEENNWWENLLDENTFKEADYSGKMVLLLDILSTCSELGDKALVFS
QSLTTLDLVEFYLSKLKIKEKDGKYWKQGKDWYRIDGSTPSSERQNLVEKFNDPENVRVK
CTLISTRAGSLGINLHAANRVILLDGSWNPTHDLQAIYRVWRYGQTKPVYAYRLMAHGTM
EEKIYKRQVTKEGLAARVVDRQQVSRTISKEEMLHLFEFGDEELLEQSENGSAMNGHSKV
ETEKRATTNPSGTTEHLPLDRLMVNLLHDHSRWIASYHEHEALLQENEDERLTKEEQELA
WLSYNKLLEVGPRKATHDPERKLNTVPTESNLLQPPKVTSRNRQLPQQPKVNLNNQKKCN
NLSHLLTLRSQGTKPGCSTTCKECGQDISWETLNRDGRSR
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagaatagaaaattatctgatgacatgtccaagaaaacggaatctattcactca
aatggacaggcacaggaagacaaagctacaattattgaacctgaaagtgatgcaactaat
tttgaagtggaaactgagacagcacatggtgtctgtgaggtgcacaaggtgcatggacat
ggaaccatggaaaatggtctgcatgaggaagcatccactgctgatgatgattcagagagt
aactcgtatgaataccttcttcaggaatcggacaatgagcaatcttcagaatctgatgct
ggcgagggagacaatgaggcacctctaactgaggaagaagttgaagcattagtcaccgaa
ttcctcgacgttgagagcaaggcagctcaagcgcaagaatcgcttgaaaaggagtcgttg
gacaagattgaagctgaagtaagattggagttatcggagaggctccaaggagacgagtta
gagttagcagtttctactgagatgaagcaatacaaggaggagtgggaatctgaacttgat
gatctggagactcacattgcagttctcttggagcaactggatgctgctggtattgaactt
cccagcctctataagtcaatagaaagtcaagttccaaatgtttgtgaaactgaagtatgg
aagaacatgactcattgggctggttctcaagtgcctgaggaagctaatcaatcaatcaga
aaagctgatgaatacctccaatcctgtagacccgtaaggagaaaacatgggaagctgctg
gaggaaggtgctagtggttttcttgctggaaaaatccctgttgaggatgatggatctgta
aaatgccatgagaaaagttggaatgtattcaatgaacttaccaaatctcaggaatatgct
gaacatacttttggaagtagcaactgggcatcggtgtatctggccagtaccccacaagaa
gctgctgccttaggtctccagtttccaggagttgatgaggtggaggagatagctgaagtt
gagggtgctgttggtgacataaaatgtgtcgatgaaatagagctttctgaagaacagaga
agaaaatacagaaaggtagcagaagaggatgatgcaaagataacaaaacgtctacggcgc
catttgaaagaaagaaggacaagacaccggtacaagggggactttggtttggcctcacca
tcaaatggatgctgtgagctgcctcctgagaaacccaaaacagatgaaaatggaatttct
gttgagctggcaaagcgtgcacgtgaagatgatgttgagttgaaccataagaggtcaaaa
actgtaattatcgaaagtgatgaggacatggagactgagagcaagcctgcttcagcacca
agtgaaaatgtgtctaagattattgatcttgatagccctaagcttggtgataaagtttgg
cctaaagctttcaagtgtactatttgcactgaaatgttgaatgccccagaagtgcatcgc
cacccagtattggatgttatagtttgtggatcttgcagatttctagtgatagagaggaac
cgtcttgaggatcccgtgtctggtggttattgcacctggtgtgtacaaagtgaacagctt
caaagttgcagctcttgtaaactgcttttctgcagaaattgcttgtcaaagaattttggt
gaagaaggcttatcagaagctaaagtaactggttggcaatgttgctgctgcctacccagt
caactggaacacttaatttctgaatgtgacaaggccctgagtggtgttgaatcttctgac
ccagagagtgactttgcagatctttctgtaatagagagcaatggtccttttagcaagggg
aaaatgaaaaagaggataagaaggatcatgggtgatgaagaacttggagaggaaacaaag
cgtaaaattgcaatggagaaggctaggcaagaacatttgaagtccatgcaagagcagtct
gccagcaagtctgccagcaagttaaagagcaacagtattggaacttcctttgaagcacca
actgaggtttctcttgaatatgttgaggatgggcatatagtaaatgttgcccgtgaggaa
gatgaagctcctgttagaattccaagcagcatatctgctaaactgaaacctcatcaggta
tcaggaataagatttttgtgggaaaatgtgatccaatctgtcaagaaggtcaaatctggg
gataaaggttttggttgcattttggctcacaacatgggccttgggaaaacttttcaggtt
attacattcctgtacactgttatgagatgcacccagttgggattgcgaacagtactcata
gttacccccgtcaatgttttgcataactggaagaaagagttcatcaagtggcgtccaaca
gaactgaagccacttcgcgtatatatgttggaggacgttgcaagggcaaatattctgtat
ttactaaaaaagtggcaagcaaaaggtggtgtgcttctgattggttattcagcatttaga
aacctttcccttggaaggagtgcaagggacaaaaccgttgcaaacgagataactaatgct
ttgcagggtgggcctgatattcttgtatgtgatgaagcacatataattaagaataggaga
gctgacactacacaagctctgaaacaagtaaagacacagagaagaattgcgttaactgga
tctccgttgcagaataatttgatggagtattactgtatggttgattttgttagagaaggt
tatcttggaagtagccatgagttccgtaacaggttccagaaccccattgaaaatggacag
cacacgaattctacatcagatgatgtcaagatcatgaatcaacggtcacacattctgtat
gaacaactgaagggatttgtccagcgaatggacatgaacgtggtgaagaatgatctacca
ccaaagaaggtttttgttgttactgttaaactctctcaactccaaagaaagctgtacaga
agattcttggacgtgaatggtttctcaagcagtgctgcttcagaaaagtcttttcagcgc
agttgtttctttgccaagtaccaaacgttagccctgatatggaaccatcctggtcttctg
cagatggctaaagaacagaaaggaaatttgcgtcaagaagatgttgagtcctttctgatg
gatgagagttctagtgatgataatattgaaaattacttgccaaatggagagaagctgaga
agcagaaatgatcagccatccaagaaaacttctgacgttgtaaatgaggaaaataactgg
tgggagaatcttctggatgaaaacacatttaaggaagcagattacagtggcaaaatggtt
ttgctccttgatatcctgtcaacatgttctgaattgggtgacaaggcgttagtgttcagc
cagagcctgaccactctggatttagtggagttttatctatctaaattgaagattaaagaa
aaagatggcaaatattggaaacaagggaaggattggtataggattgatgggagcactcca
tcttctgagcgacaaaatctcgtggagaagtttaatgaccctgaaaacgttagagtgaaa
tgtacattaatatctactcgtgctggatccctaggcattaaccttcatgcagccaaccgt
gtgattcttcttgatggttcatggaatccaacccatgatttacaagccatctatcgggtt
tggaggtatggccagaccaagcctgtgtatgcttaccgccttatggcacatgggacaatg
gaagagaaaatatataaacggcaggtgacaaaagaagggcttgcagcaagggtggtggat
aggcagcaagtgtctagaacaatctctaaagaagagatgctacatcttttcgaatttggt
gatgaggaattactggagcagagcgagaatggttctgccatgaatggtcacagtaaagtt
gagactgagaagcgggctactaccaaccccagtggaaccactgaacatttacctttggac
aggctcatggtgaacctacttcatgaccactctcggtggattgcaagttaccatgaacat
gaagccctactgcaagaaaacgaagatgaaaggctcaccaaggaggagcaagaactggcg
tggttaagttacaataagttgctagaagttggcccaaggaaagctacacatgaccctgag
agaaaactaaatactgttccaacagagagcaaccttctgcaaccacctaaagtcacctca
agaaaccggcaactcccccaacagcctaaggttaatttaaacaaccaaaagaagtgcaac
aacctgagccacttgcttactctgagaagtcaaggcaccaagcctggatgcagcacaact
tgtaaagaatgtggccaggatattagttgggagacactaaacagagacggtagatcaagg
tga
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