Oryza brachyantha (malo sina): 102712579
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Entry
102712579 CDS
T02995
Name
(RefSeq) zinc finger protein MAGPIE-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obr03000
]
102712579
Transcription factors [BR:
obr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102712579
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
Motif
Other DBs
NCBI-GeneID:
102712579
NCBI-ProteinID:
XP_040375860
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Position
1:6087993..6090039
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AA seq
488 aa
AA seq
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MASEAAAAAISNPFAPLTNQQQEHPPLPPPPKKKRNLPGTPDPEAEVIALSPRTLLATNR
FVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRSGKEPRKRVYVCPEKSCVHHNPSRALGD
LTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFIT
HRAFCDALAEETARLNAASSTAAAAAAATSLCGQSYLFAGSGGAGMAAARPNMMLPPAPG
AHLKPGQMLGPAAGVGDLCDGGVARHGGLSLWGGDALPPMSHIGVLANGGVAPVPPQLYA
DLFAPGSGAPPQFDAAQLSWLYGNGKLSSSNSSELTSATAAAAAAAKEAEDSVPSVFSNQ
QHAKPAAPTDMSATALLQKAAQIGAVTSTAAVPLVGAFEPTKSGATASPADAFGKFDGAA
MFAASHHNANLGSAMSELTAAAGNVPYDVLSAVRHAGLKDAGVGREETRDFLGVGVQALC
SSSIHGWI
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaagcagcagcagcagccatctccaaccctttcgctcctctcaccaaccag
cagcaagaacaccctcctcttcctcctcctcccaagaagaagcgcaacctccccggcaca
ccagacccggaggcggaggtgatcgcgctgtcgccgaggacgctgctggcgacgaacagg
ttcgtgtgcgagatctgcgggaaggggttccagcgcgaccagaacctgcagctgcaccgg
cgaggccacaacctgccgtggaagctgcggcagcggagcgggaaggagccgaggaagcgg
gtgtacgtgtgcccggagaagagctgcgtccaccacaacccgtcgcgcgcgctcggcgac
ctcaccggcatcaagaagcacttctgccgcaagcacggcgagaagaagtggaagtgcgac
aagtgctccaagcgctacgccgttcagtccgactggaaggcccactccaagacctgcggc
acccgcgagtatcgctgcgactgcggcaccctcttctccaggagggacagcttcatcacg
caccgcgcgttctgtgacgcgctggcggaggagacggcgaggctgaacgccgcgtccagc
accgccgccgccgccgcggcggcgacgtcgctgtgcgggcagagctacctcttcgccggc
tcgggcggtgcggggatggccgcggcgcggcccaacatgatgctgcctccggctcctggc
gcgcacctcaagccgggacagatgctcggtccggcggccggcgttggggacctgtgcgac
ggtggcgtggcgcggcacggcgggctgtcgctgtggggcggcgacgcgttgccacccatg
agccacattggcgtccttgccaatggtggcgtggccccagtgccgccgcagctgtacgcg
gatctcttcgcgccgggctccggcgcgccgccacagttcgacgcggcgcagctgagctgg
ctgtacgggaacggcaagctgtcgtcgtcgaattccagcgagctgacgagcgccacagct
gccgcggcagcggcggcgaaggaggcggaggacagcgtgccgtccgtgttcagcaaccag
cagcacgcgaagcccgcggcgcccaccgacatgtccgcgacggctctgctgcagaaggcc
gcgcagatcggcgccgtgacgtcaactgccgcggtgccgctggtgggggcgttcgagccg
accaagtccggcgccaccgcctcgccggccgatgcgttcggcaagttcgacggtgcagct
atgtttgccgcaagccatcataacgcaaacctcggcagcgcaatgagcgagctcacggcg
gccgccggcaacgtgccttacgacgttttgtcggcggtgcgccatgccggcctgaaggac
gccggcgtcgggagggaggagactagggatttcctgggcgttggcgtgcaagcactgtgc
tcgtcgtccatacatggatggatttaa
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