KEGG   Oryza brachyantha (malo sina): 102712707
Entry
102712707         CDS       T02995                                 
Name
(RefSeq) target of rapamycin complex subunit LST8
  KO
K08266  target of rapamycin complex subunit LST8
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:obr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    102712707
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:obr04131]
    102712707
Membrane trafficking [BR:obr04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    102712707
   mTORC2 complex
    102712707
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st WDR55 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 Beta-prop_EIPR1 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_Vps41 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_Aladin NBCH_WD40 Beta-prop_IFT140_2nd Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_ACSF4 PROPPIN Beta-prop_SPT8 Nucleoporin_N Beta-prop_DCAF12 CFAP43_N Beta-prop_WDR19_2nd VPS8_N Beta-prop_WDR35_TULP_N PALB2_WD40 CPSF_A Beta-prop_pof12
Other DBs
NCBI-GeneID: 102712707
NCBI-ProteinID: XP_006650409
UniProt: J3LRL5
LinkDB
Position
3:22051856..22055956
AA seq 316 aa
MAQPSVILATASYEHTIKFWEAKSGRCYRTLQYADSHINRLEITPDKRFLAAAGNPHIRL
FDINSNSTHPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREYESRA
AVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAA
NNHGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVK
IWNVDGFKLEKTLIGHQRWVWDCVFSVDGAYLITASSDSTARLWTMSTGEAIRVYSAHHK
PVVCCALHDGAESAPS
NT seq 951 nt   +upstreamnt  +downstreamnt
atggctcaaccttctgttatcctagcaactgcaagttatgaacacacaataaaattttgg
gaagctaagagtggtcgctgttaccgtactctacaatacgcagactcgcatattaatcgc
cttgagataaccccagacaagcgtttcttagctgctgctggcaatcctcatatccgtctt
tttgacattaactcaaacagtactcatccggtaattagctatgattcacacactagtaat
gtgatggctgtgggattccattgtgatggcaactggatgtattcaggttctgaggatggt
actgtgagaatctgggatttgcgcactgccacctgtcaacgagaatatgagagtcgagct
gctgtgaacactgtggttctgcacccaaatcagaaagagctaatatctggtgatcagaac
ggaaacatacgggtgtgggatttggctgctaattcatgcagctgtgaactggtgccagag
gttgatacagctgtaagatccctgacagtcatgtgggatgggagtatggtggttgctgca
aataaccatgggacatgttacgtctggcgcttgcttaagggtactcagacaattacatgc
tttgaacccctccataaattgcaagcgcatgatggttacattctgaagtgcctgctttca
ccagagttttgtgaccccaacaggtatcttgcaacagcctcatctgatcacactgtaaag
atttggaacgttgatggcttcaaattggaaaaaactttaataggtcaccagcggtgggta
tgggactgtgtattctcagtagatggtgcttatctgataaccgcttcttctgactctact
gcgagattgtggacaatgtcaactggagaggcaatcagggtttactcggcgcaccacaaa
ccagttgtctgttgtgctcttcatgatggggctgaatcagcaccatcataa

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