Oryza brachyantha (malo sina): 102712711
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Entry
102712711 CDS
T02995
Name
(RefSeq) DNA topoisomerase 6 subunit A3
KO
K10878
meiotic recombination protein SPO11
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obr03036
]
102712711
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
102712711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
AhpC-TSA_2
AhpC-TSA
Topo_VI_alpha
Redoxin
Motif
Other DBs
NCBI-GeneID:
102712711
NCBI-ProteinID:
XP_015689850
LinkDB
All DBs
Position
3:8332274..8338316
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AA seq
720 aa
AA seq
DB search
MAARAPLAVPVPVPQVATSTSSPRPSATPLAASGLLGARGPCGGSLLYRRQPKRRLRFPV
AVAAAKPDAVEGAAEAAASPVDGLAKSLRGVEVFDLSGKAVPIVDLWKDRKAVVAFARHF
GCVLCRKRADLLAAKQDAMEAAGVALVLIGPGTVEQAKAFYNQTKFKGEVYADPSHSSYN
ALEFAFGLFSTFTPSAGLKIVQLYMEGYRQDWELSFQKTTRTKGGWYQGGLLVAGPGIDN
ISYIHKDKEAGDDPDMKDLSRVPPPSPPLPKSPSFPRAPASESLDMSEKKRRAGAAAGSS
ASKKPRVSSATSYAESLRTKLRPDASILATLRSLASACSKSKPAGSSSSASKALAEDDPA
ASYIVVADQDSASVTSRINRLVLAAARSILSGRGFSFAVPSRASSNQVYLPDLDRIVLVR
RESARPFANVATARKATITARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQAQSDAVLD
DVSCMLGCTRSSLHVVASEKGVVVGRLTFADDGDRIDCTRMGVGGKAIPPNIDRVSGIES
DALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALV
DSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDI
KVGKELLEEDFVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgcgcgccgctcgccgtgccggtgccggtgccgcaggtggccaccagcacc
agcagcccgcgaccgtctgcgacgcccctcgcggcgtcgggcctcctcggcgcgagggga
ccttgcggcggctccctactctaccggcggcagccgaagcgtcgcctccgctttcctgtt
gcggtggcggccgccaagcccgacgccgtcgagggtgccgcggaggcagccgcatcgccg
gtggatgggctcgcgaagtctctccggggggtggaggtgttcgatctgagcggaaaggcg
gtgcccatagttgatctgtggaaggacaggaaggccgtcgttgctttcgcccgccatttc
gggtgtgtactgtgccggaagagggccgaccttcttgcggctaaacaggatgcaatggag
gctgcaggggttgctcttgttttaattggaccaggtactgttgaacaggcaaaggcattt
tataatcaaaccaaattcaaaggagaagtatacgctgatccaagtcactcgtcatataat
gcccttgaatttgcatttggattgttctccacatttactccatcggccggtctgaaaatt
gtacagttatacatggaaggatacaggcaggattgggaactgtcattccaaaagactacc
agaacgaaaggtggatggtatcaagggggactacttgttgcaggaccaggcatcgacaat
atttcatatattcacaaggacaaagaagcaggagatgaccctgatatgaaggatttgagc
cgcgtcccgccgccgtctccgccgctccccaaatcccctagttttccccgcgcccccgcc
tccgaatccctcgacatgtcggagaagaagcgccgcgccggggccgcggcgggctcctcc
gcctccaagaagccgcgggtctcctcggccacgtcctacgccgagtcgctccgcacgaag
ctccggcccgacgcctccatcctcgccaccctccgctccttggcgtccgcctgctccaaa
tccaagcccgcggggtcgtcgtcctcagcctcgaaggccctcgccgaggacgacccggcc
gccagctacatcgtggtggccgaccaggactccgcctccgtcacatcccgcatcaaccgc
ctcgtcctcgccgcggcgcgcagcatcctgtccggccgggggttctccttcgcggtgccc
tcccgcgcctcctccaaccaggtctacctcccagacctcgaccgcatcgtgctcgtccgc
cgtgagtccgctaggcccttcgccaacgtcgccaccgcgcggaaggccaccatcaccgcg
cgcgtcctctccctggtccacgccgtcctccgccgggggatccacgtcaccaagcgtgat
ctcttctacacggacgtcaagctcttcggcgaccaggcgcagtccgacgccgtcctcgac
gacgtctcctgcatgctcggctgcacccgctcctccctccatgtcgtcgcgtccgagaag
ggtgtcgtcgtcgggcgcctcaccttcgccgacgacggcgaccggatcgactgcacgcgc
atgggcgtcggcggtaaggccatcccgcccaacatcgacagggtgtcaggcatcgagagc
gacgctctcttcatcttgctggtggagaaggacgccgcattcatgcggctcgccgaggac
cggttctataaccgcttcccgtgcatcatcttgacggcgaaggggcagcctgatgtcgcc
acacggttgttcttgcggcggcttaaggtggagctgaagctgccggtgctggcactggtg
gactccgacccatatggcctgaagatcttgtcagtgtatatgtgcggttccaagaacatg
tcatatgacagtgccaaccttacgacgccggatatcaagtggctcggagtgcggccaagt
gatctggacaagtatcgggtgccggagcagtgccggcttccgatgactgatcacgacatc
aaggtgggaaaggagctgcttgaagaggactttgtaaagcaaaatgaaggatgggtgaag
gagttggagacgatgctgcggacgaggcaaaaggctgagatacaggctctcagttcattt
gggttccaatacctcactgaagtctatttacctctcaagctgcagcagcaggactggatt
tga
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