KEGG   Oryza brachyantha (malo sina): 102712796
Entry
102712796         CDS       T02995                                 
Name
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:obr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    102712796
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:obr04131]
    102712796
   03029 Mitochondrial biogenesis [BR:obr03029]
    102712796
Membrane trafficking [BR:obr04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    102712796
 Others
  Specific organelles associated proteins
   Auto phagosome
    102712796
Mitochondrial biogenesis [BR:obr03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    102712796
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_SCAP Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ATG16 Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_RIG_1st WD40_like VPS8_N Beta-prop_DCAF12 CHASE2
Other DBs
NCBI-GeneID: 102712796
NCBI-ProteinID: XP_040378555
LinkDB
Position
3:25227017..25230138
AA seq 510 aa
MTVVEAEAGREAIRRALRSLRRRHLVEEGAHRPAIEALARPFAAQAVEWKEKAEKHELEL
QQCYKAQSRLSEQLVAEIEEGKASIALLKEKETLITTLQNELERTSEENIQLKQSLEEKT
CALDLLIQEHQTVKAELEQALTKQKVAEDENRNLIDRWMLEKMKDADRLNEANAMYEDMV
LKLKSAGVGGIQHNALQEADGIIRRSETGYLDMETPIPSTCRITIRAHDGGCGSIIFQHN
TDKLISGGQDQTVKIWSAHTGALNSTLQGCLGSVNDLAVTNDNKFVIAACSSNKLFVWEV
NGGRPRHTLTGHTKNVLSVDASWVKSCVLASSSADHTIKIWDLQTGFCKSTIMSGSTANS
LAFIDGDILCSGHRDGHLRLWDIRSGKCTSQTFAHLDVSSVCVSRSKNFILTSGKDNVHN
LFDLKTMEVCGKFNAMGNRVVGSWGRPCISPDENSIAAGANDGCVYIWSRLKKDRVPTIL
QGHSSSVISSAWCGLGPLATADKNHIYIWT
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgacggtggtggaggccgaggccggcagggaggcgatccggcgcgccctgcggtctctg
cggcggaggcatctcgtcgaggagggcgcccaccgccccgccatcgaggcgctcgcccgg
cccttcgccgcccaagcggtggagtggaaagagaaggctgagaagcatgaattggagctg
cagcaatgctataaagctcagtcccgtctgtccgagcaactcgtcgccgagatagaagag
ggaaaagcatcaatagcactacttaaagagaaagaaacattgattactactttgcagaat
gaactcgagcgaactagcgaagaaaatatacagctgaagcaatcacttgaagaaaaaaca
tgtgctttagatcttctaattcaggagcaccagacagttaaagctgaacttgaacaggct
ttaacaaagcagaaagtggcagaagatgaaaacaggaatctgattgatcgatggatgctt
gagaagatgaaggatgcagataggcttaatgaggcaaatgcaatgtatgaggatatggtc
ctaaagctgaagtctgctggggttggtggtatacaacacaatgcactacaggaagctgat
ggcatcattcgtcgttctgaaactgggtacttggacatggaaacacctatcccatctaca
tgcagaatcactatccgtgctcatgatggtggttgtggatctataattttccagcataac
acagacaaactaatcagtggtggccaggatcaaactgtcaagatttggtctgcacacacc
ggtgctttaaactccactctacaaggctgtttggggtctgtcaatgatcttgctgtgact
aatgacaacaagtttgtgattgctgcctgtagctctaacaaattgtttgtatgggaagtt
aatggggggcgccctcgtcacactctgactggtcacacaaaaaatgttttatctgttgat
gcaagctgggtgaagagctgtgttcttgctagttcatctgccgatcatactatcaagatt
tgggatcttcagacaggcttctgcaaaagcaccataatgtcggggagcaccgccaactca
ctagctttcattgatggtgatatcctttgctcgggtcatagggatggacaccttcggtta
tgggacattcgtagtggaaaatgcactagccaaacatttgctcatcttgatgtcagctct
gtttgtgtgtcacggagcaaaaatttcattcttacaagtggaaaggataacgtgcacaac
cttttcgatcttaaaacaatggaggtttgtggaaaattcaatgccatgggtaacagagtg
gttggcagctggggcaggccttgcataagccctgatgaaaactccatagctgctggcgct
aatgatgggtgtgtatacatatggtcaagattgaaaaaggatagggtgccaaccatccta
cagggccattcttcatcagtaatttcaagtgcatggtgtgggctaggacctcttgctacc
gctgacaagaatcatatttatatctggacttga

DBGET integrated database retrieval system