Oryza brachyantha (malo sina): 102712992
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Entry
102712992 CDS
T02995
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102712992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obr03009
]
102712992
Ribosome biogenesis [BR:
obr03009
]
Eukaryotic type
Pre-60S particles
RNases
102712992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DUF4159
SET_assoc
TPR_19
Motif
Other DBs
NCBI-GeneID:
102712992
NCBI-ProteinID:
XP_006653829
UniProt:
J3M235
LinkDB
All DBs
Position
4:complement(19818683..19821534)
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AA seq
461 aa
AA seq
DB search
MGKRLAGAEKEVLVEIVRFTQKNGLKGAEGGWKDFLARNDKRFGASLSDPKKRSKDVLLA
FLVTFSKDFQNYFSKLVRRLQEQSAFQQYIKEFPDNISPEMKLVQLTAEHPEYRKNYSFP
SYKEGWKVMREGKVTNFVNSNMLAIDCEMVLCHDGTEALVRVCVVDSRLEVKLDELVNPL
KAVADYRTSITGLSKKDLKGVTCSLVDVQKSLKKILSKGKILIGHSLSKDLQALKFDYAR
VIDTAYIFKYANLPITASASLNSLCKSVLGYAVREEGEPHNCLKDAEAAMNLVIAKLKHG
FNDPIEIARNSVPESDMVKLLAHKIPVYLPCQELLKLFSGNPSIDEKNDSRIRGDYYSTC
ILFGDIDEAEKAFDELDGQETKDSSGRLQKNVLLKRDNGDVASFYIRKMAYGSQLNESEL
SKKRPPPIEDAEPTKEVDGEKQKKRKTGKKHEKKTKISVAE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcggctcgccggcgccgagaaagaggtgctcgttgagatcgtgaggttcacc
cagaagaacgggctgaagggcgccgaggggggatggaaggatttcttggctcggaacgac
aagaggtttggagcttccctcagtgaccccaagaagcgctccaaggatgtgctgcttgct
ttccttgtaaccttctccaaagatttccaaaattacttcagcaaattagtaaggcgtctt
caggaacaaagtgcgtttcagcaatatatcaaggaatttcctgacaacatttctcccgag
atgaagcttgttcaactgacagcagaacacccagagtaccggaaaaattacagcttccca
tcttacaaagagggatggaaagtgatgcgagaaggcaaagttaccaattttgtgaactca
aatatgttggcaattgattgtgagatggtcctttgccatgatggcacagaagccttggtc
cgagtatgtgtagtagacagcaggctagaggttaagttagatgaacttgtgaacccctta
aaagctgttgcagattataggacaagcattactggtttgtctaagaaggatttaaaagga
gtcacatgctcattagttgatgttcagaaatcgttgaagaaaatcttgtctaaaggaaag
attttgattggtcatagcctatcaaaagatttacaggctcttaagtttgattatgctcgg
gtcattgatacagcatacatctttaagtatgcaaatttgcctattactgcatcagcctct
ttaaacagcctgtgcaagtcagttttggggtatgctgttcgggaagaaggagaaccacat
aactgcttgaaggatgcagaagccgcgatgaatctagttatcgctaagcttaagcatgga
tttaatgatcccattgaaattgcaagaaatagtgtacctgaatctgatatggtgaagttg
cttgctcataaaattccagtctacttgccttgtcaagagctgctcaaattattctctgga
aatcccagtattgatgaaaagaatgattcaaggattcgtggtgactattactctacatgt
atcttgtttggagacatagatgaggcagagaaggcatttgatgaactggatggccaagag
accaaggactctagcgggcggcttcaaaaaaatgttctgctgaaacgtgacaatggggat
gtggcaagcttctatatccgaaagatggcgtatggttctcaactaaacgagtcagaactt
tcaaagaagaggccaccacctatagaggatgcagaaccgacaaaagaagttgatggggag
aagcaaaaaaagcgaaaaactggtaagaagcacgagaagaaaacaaagatatcagtggct
gagtga
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