Oryza brachyantha (malo sina): 102713228
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Entry
102713228 CDS
T02995
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102713228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obr03400
]
102713228
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102713228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
102713228
NCBI-ProteinID:
XP_040377503
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Position
1:complement(3121424..3131828)
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AA seq
1218 aa
AA seq
DB search
MQQPRRQQSILAFLQRKPPAAKEDGATPEKPPRPPAASVAGIMERLVRPPQQGRDQDASQ
VRHVEQKVLPVKNQTPSNECSSALFSGSCNGVDNRATKLVAGKGSSMPPLQEPLKSLRSP
TDEFVRASMLFQELGSDQTLLPECPKKFPFESSNNKCIQDNSSFEEFDVQTPSQDPSKGV
LWRSSSGASTPLTESDSDKTPLQHPSKKFSLVSSNGEYVRATTLFQLDSNCTPSREPSEK
LPSGPSDLQYIKATNLFAELDSNGTPSQNHLKKISSVFMNDKRIGAGATLFSEFNSSPLK
PETPLMRAVTPRLKRVQEDQRASSNDQCSPLWVPNKKVKSAQCSPAEKKVHSEMAESARS
KFEWLNPSNVKDANGRRPTDPLYDKTTIFIPPDALRKMSTSQKQYWNIKCKYMDIVLFFK
VGKFYELYELDAEIGQKELDWKMTISGVGKCRQVGISESGIDVAVEKLLARGYKVGRIEQ
MESADQAKARGSNSVIQRKLVHVSTPSTVGDSNIGADAVHLLSLKEIALTSNGSRVYGFA
FLDYAALKIWVGSFHDDDTFAALGALLVQVSPKEIIYETSGLSKETHRSIRKYASAGSVK
MQMTPLYGIDLSEASEIQMLVQSRGYFKASTSSWLSALDSSVNKDAVICALGGLISHLTR
LMLEDVLRNGEVLPYHVYTTCLRMDGQTLVNLEIFSNNFDGGSSGTLYKHLNHCITPSGK
RLLRRWICHPLKDINAINERLDIVEGFIQNCGLGSVTLEHLRKVPDLERLLGRVKSTVGL
SSTVLLPFVGEKILKRRIKTFGMLVKGFRIGFDLLDVLRRQDHGISALSKVADVPTLSTL
NELIHQFEEAIDNDFPRYQDHNVRDDDANTLAILVELFVGKASEWSLVINALSTIDVLRS
FAAMTLSSFGTMCRPNILLKEKAPILKMKGLWHPYAFAESVNGLVPNDLSLGHDLSGQNR
FALLLTGPNMGGKSTIMRATCLAIVLAQLGCYVPCQSCELTLADAIFTRIGAMDRIMSGE
STFLVECTETASILEKSTEDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEVVRCRLLFAT
HYHSLTKEFASHPHVTLQHMSCVLKPRGGGHGDEELTFLYRLTSGACPESYGLQVATKAG
LPRSILERAAVAGQMMRTKIAGNFRSSEERAEFSTLHEEWLRTILAIGGVKDADLDEDTM
DTLFCVFHELKAHFRKGE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccgcgtcggcagcagtccatcctcgccttccttcagaggaagccgccggcg
gcgaaggaggatggcgcgacgcccgagaagcccccgcggccccccgccgcgtcggtcgcc
gggatcatggagaggctcgtgcggccgccgcagcaggggagagaccaggatgcttcccag
gttagacatgtggagcaaaaagtcttacctgtgaaaaatcaaactccttcaaatgagtgc
tcaagtgcattgttctcaggatcttgcaatggtgtagataacagagcaaccaagctggtt
gcaggaaaaggttcaagtatgccccctttgcaggagcccctgaagtccttaaggtctccc
acggatgaatttgttagagcaagcatgctgttccaagaacttggttcagatcagactctt
ctgccggagtgtccaaagaagttcccctttgagtcttccaacaataaatgcattcaggat
aattcatcatttgaagagtttgatgtgcaaactccttctcaggatccttcaaaaggagtc
ttgtggagatcttctagtggagcttctacgcctttaacagaatctgattcagataaaact
cctttgcagcatccatcaaagaagttctcattagtatcttctaatggtgaatatgttcgg
gccactacactgtttcaacttgattccaattgtactccttcacgagaaccctcagagaag
ctgccctctgggccttcagaccttcaatacattaaagcaacaaatttgtttgcagaactg
gattcaaatggaactccttcgcagaatcatttgaaaaaaatatcctcagtgtttatgaat
gataaacgcattggagcaggtgccacactattttcagaatttaattctagtccactgaaa
ccagaaacaccattgatgcgagcggtaactcctcgtctgaagagagttcaagaagatcaa
cgtgcgagtagcaatgaccaatgctctcctttatgggttccaaataagaaggtgaaatca
gctcaatgttctccagctgagaagaaagtccattctgaaatggctgaaagtgcacgcagc
aagtttgagtggctgaatccttcgaatgtcaaagatgcaaatggaaggcggccaacagat
ccactttatgacaagacaactatttttattccacctgatgcattgagaaagatgtcaaca
tctcaaaagcaatactggaatattaagtgcaagtatatggatattgttttgtttttcaaa
gtgggaaagttctatgaactctatgagttggatgctgagattggccaaaaggaacttgac
tggaaaatgactatcagcggggtgggaaaatgccggcaggttggaatttcagaaagtggg
atagacgttgctgtcgaaaagcttttagctcgagggtataaagttggcagaattgaacaa
atggaatctgcagaccaggccaaagccagagggtcaaattcagttattcaaagaaaactg
gttcatgtatccacaccatcaacagtaggggacagcaacattggggctgatgctgttcac
cttctttcactcaaagagattgctctaacttcaaacggttctcgggtttatggatttgct
tttctagattatgccgcgcttaaaatctgggtgggctcctttcatgacgacgatacattt
gcagctttgggggctctgttggtgcaggtctctccaaaagaaataatctacgaaacctca
ggcctttcaaaagaaactcatagatcaattagaaagtatgcttcagctggttctgtgaaa
atgcagatgaccccattgtatgggatagatttatctgaggcttcagaaattcaaatgtta
gtacaatctagaggatattttaaagcgtcaacaagttcatggttatctgcattggattct
tcagtgaataaagatgcagttatttgcgcactcggaggacttattagtcatttaactagg
cttatgctagaggatgttctgagaaatggggaggtgttaccataccatgtgtacacaaca
tgtctaagaatggatggccagactcttgtgaaccttgagattttcagcaacaattttgac
ggtggttcatcaggtaccttgtataagcacctcaatcactgcataactccatctggcaag
cggcttctaagaagatggatttgccatccactaaaagatatcaatgctatcaatgaaagg
cttgacattgttgagggcttcattcaaaattgtgggctaggatctgttacacttgagcat
ctccgtaaagttcctgatcttgagagattactaggacgagttaaatccactgttggttta
tcatctacagtcctgttgccctttgttggagaaaagatattaaaaagacggataaaaaca
tttggcatgcttgtcaagggcttccgtattggatttgacttactggatgtcctacgaaga
caagatcatggtatctcagcactgtcaaaggttgcagatgttccaacattgagcaccctt
aatgaattaattcatcaatttgaagaagcaatagacaatgattttccaagataccaggat
cataatgtcagagatgatgacgcaaacactttggctatactagtggagctttttgttgga
aaagcttctgaatggtctctagtgatcaatgctctcagcactatcgatgtgcttaggtcc
tttgcagccatgacattgtcgtcatttggcacaatgtgcagaccgaatattctgctgaaa
gaaaaagcgcctatacttaagatgaagggtctatggcatccttatgcttttgcagaaagt
gtgaatgggctagtaccaaatgatctatctcttggtcatgatttatctggtcaaaatcgc
tttgcgttgttgttgactggtccaaacatgggcgggaaatctacaataatgcgtgccacc
tgtctggctatcgtgcttgcccagctaggctgttatgttccctgccaatcatgtgaattg
acccttgcagatgccatatttacaagaattggtgcaatggaccggatcatgtctggagag
agtacttttcttgttgaatgcactgagactgcatctattcttgagaaatcaactgaggat
tctcttgtcttgcttgatgaacttggccgaggaactagtacatttgatggatatgcaatt
gcatatgcagtattccgacacctcgtggaagtggtccggtgccgtcttctcttcgccact
cactaccattccctcaccaaggagttcgcctctcacccccatgtgacccttcagcacatg
tcctgcgtgctgaagccaaggggcggcggccatggcgacgaggagctcaccttcctctac
cggctcacgtcgggcgcctgcccggagagctacggcctgcaggtcgccacgaaggcaggg
ctcccgaggtcgatcctggagagggcggcggtcgctggccagatgatgaggacgaagatc
gccgggaatttcaggtcgagcgaagagcgggccgagttctcgacgctccatgaggagtgg
ctgaggacgatcctggcgatcggaggcgtgaaggacgcggacctggacgaggacaccatg
gacacgctgttctgcgtcttccatgagctcaaggctcacttcaggaaaggggaatga
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integrated database retrieval system