Oryza brachyantha (malo sina): 102713373
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Entry
102713373 CDS
T02995
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102713373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obr03400
]
102713373
Enzymes [BR:
obr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
102713373
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
102713373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
HIRAN
FAN1_HTH
TPR_7
Sgf11
Motif
Other DBs
NCBI-GeneID:
102713373
NCBI-ProteinID:
XP_006656691
UniProt:
J3MBP4
LinkDB
All DBs
Position
6:complement(2512209..2519067)
Genome browser
AA seq
970 aa
AA seq
DB search
MLRGRESLVRLIGRRRRCSSPLPAALSFGALPPSSPSRSLQVDAGDAEREAAAAGSSSGG
LARDGAGAGAEWVACPVCGEPIRGTDYCVNTHLDMCLTRGTKRKLTQSTLLDFSFSKKAA
GDPALNNNPETENMELTDGNVSSDGAFFSLNNETVNPKGSANASSPGCLYDSLDTAETCD
TCIPPDTFLSYRENTANNGVGKKNLSHIPPTEAFSCTIDALSVTDSSNIVVVDTVIVGRR
FHENIELQEGVSIALSRDPQNAKDPDAIKVLYAGYEREQMLGYLPRELAKVLAPLLDRQY
IECKGCVVGVPEQQFDHVPIQLTCQKCKDKNETHDDLKHPQFLWENFIGAVGNGKLQRPS
STRYQTNFSLMITDVMENHSRLFTDKEKSFLDSFQLLSDDGQRLFVRIYTRKGPWFQISS
ISYREISDLGQAAMELKLAGYIDMISSVNDLSKYNMKEVFDVLSVPEMKEILKELQKTNA
NCTRRHELLSTLQSLYDSGTCTVLQKRILKWIGTCIRTSDMADELLWRVQRLFFLNGDQD
LSSFLLVDLGLVRFPVYACTISNRVFKERSDLLQYEEAIQVAQVMDQSLDNNNMEIVTRC
IELSENRLSALPKEENATMAECPPSFFSRFSASWVYPKILTLGVSVYERDRRYTDAIRIL
KRLLSTVYSDRKRGYWTLRLSVDLEHMNRQNESLSIAEAGVIDPWVRAGPKIALQRRVLR
LSKPPRRWKTPSYANAVKRNINEVKIEGRPLNCETGAKNIFYGYDGELCGVEQLALQYYA
DEGGGWQGTHSEGGIWMTIFGLLMWDVIFSDIVDVFQAKFQTAPLDLETDDFYRSRKDLV
ESQLKKIQDGMAEEMLISSWELHQGTSCRGVNWDRNSLTDLRAAVVCTGGHRLASLLRHL
ALDYRSWSSGTPDLLLWRFPDERGGGEAKLVEVKGPRDQLSEQQRAWILVLMDFGFDVEV
CKVSPVSKRR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgctgagggggcgggagagcctggtccgcctcatcggccggcgccgccgctgctcctcc
cctctccccgccgccctctccttcggtgccttgcccccgtcgtccccttcccgctccctc
caggtcgacgcgggtgacgcggagagggaagccgctgcggctggctcttcgtcgggaggg
cttgcgcgcgacggcgccggcgccggcgcggagtgggtggcctgccccgtctgcggcgag
cccatccgtggcacggattactgcgtcaatacgcacctcgatatgtgcctgacaagagga
acaaaacggaagttaactcagagcacccttcttgatttcagtttcagtaaaaaagccgcg
ggtgatcctgctttgaacaataatcccgagacagaaaatatggaactgactgatggaaat
gtatctagtgatggagcattcttttcgttgaacaatgaaacggtcaatccaaagggaagt
gctaatgcttcatcacctggttgcctttatgactctcttgacactgcagagacatgtgat
acatgtattccaccggatacattcttatcatacagggaaaatactgcaaacaatggtgta
ggaaagaagaacttgtcccatatccctccaactgaggcattctcatgtactattgatgca
ctttcagtgacagattctagcaacatagtagtagttgacactgtcatagtgggcaggagg
ttccatgaaaacatagaactgcaagaaggtgtgagcattgctctttccagagacccacag
aatgcaaaggaccctgatgctatcaaggtgctttatgcaggctatgagcgtgaacagatg
cttggatacttacctcgagagctggctaaagttctagctcctctactggacagacaatac
attgaatgcaagggttgtgtggttggtgtgcctgaacaacaatttgatcatgttccaatc
cagcttacttgtcagaaatgtaaagataaaaatgaaacacatgacgatctgaagcatccg
cagttcttatgggaaaatttcataggtgctgttggaaatggaaagttgcagcggcctagc
agtacaagataccaaacaaattttagtttgatgataacagatgtgatggaaaaccattca
cgcctctttactgacaaggaaaagtcatttttagattcttttcagttgttatcagatgat
ggacaaaggctctttgttaggatctacactcgaaaagggccatggtttcaaataagcagt
atctcatatcgagagatatcagatctggggcaggcagccatggaacttaagttggcaggt
tatattgacatgatatccagcgtgaatgatctatctaaatataatatgaaggaggttttt
gatgtgctaagtgttcctgaaatgaaagaaattctaaaagagctccaaaagactaacgct
aactgcacacgccgacatgagcttcttagcaccctccagtctttatatgatagtggaacc
tgcacagttctacaaaagcgaattctgaaatggataggaacatgcataagaacttctgat
atggctgatgaacttctgtggcgtgtccagaggctcttttttctaaatggtgatcaagac
ctttcatcctttctgttagtggatcttggtcttgtgagatttccggtctatgcctgtacc
atttctaaccgtgtttttaaggaaaggagtgatctacttcagtatgaagaggctattcaa
gtggcacaggtaatggatcaatctcttgataataataacatggaaattgtgacaagatgc
attgagttatctgagaatcgactaagcgccttgccaaaagaagaaaatgcaactatggct
gagtgtcccccatcattcttctcacgtttttcagcttcctgggtctatccgaagatactt
actttaggtgtttctgtctatgaacgtgaccgtaggtatactgacgcaattagaattcta
aagagacttcttagtacagtttattctgatagaaagcgaggatattggaccctgaggtta
tctgttgatttggagcacatgaatcgtcaaaatgagagcttgtcaatagctgaagcaggg
gtaattgatccatgggtccgtgctggtccaaagattgcactgcaaaggagagttttgcgt
ttaagcaaacctccacggcgctggaaaactcccagttatgccaatgctgttaagagaaat
ataaatgaggtaaaaatagaaggaagaccattaaattgtgaaacaggtgcaaagaacata
ttttatggatatgatggtgaactttgtggggtagagcagttagctctacaatattacgca
gacgaaggagggggttggcaaggtacccattcagagggtggcatttggatgacaatcttt
ggcctcctaatgtgggatgtaatattttcagacatagtggatgttttccaggcaaaattt
cagacagcccctctggacctggaaacggatgacttctacagatcaagaaaggacctcgta
gagtcccaattgaaaaaaattcaagatggtatggctgaagaaatgcttatcagttcgtgg
gagctacatcaagggacatcctgcagaggcgttaactgggaccggaattccttgacagat
ctacgagctgccgtcgtatgcaccggtggccatcgcctggcatctctcctccgacatcta
gccctcgattacagaagctggtctagtgggacgcccgatttgctgctatggcgtttccct
gacgaacgaggtggcggcgaagctaaacttgtggaggtcaagggaccgagggaccagctg
tctgagcaacagcgtgcctggatacttgttctcatggactttggatttgatgtggaagtt
tgcaaagtgagcccggtttctaagaggagataa
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