KEGG T02995: 102713407

Oryza brachyantha (malo sina): 102713407

Entry

102713407         CDS       T02995

Name

(RefSeq) uncharacterized protein LOC102713407 isoform X2

K10842

CDK-activating kinase assembly factor MAT1

Organism

obr Oryza brachyantha (malo sina)

Pathway

obr03022

Basal transcription factors

obr03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:obr00001]
09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102713407
  09124 Replication and repair
   03420 Nucleotide excision repair
    102713407
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obr03021]
    102713407
   03400 DNA repair and recombination proteins [BR:obr03400]
    102713407
Transcription machinery [BR:obr03021]
Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     102713407
DNA repair and recombination proteins [BR:obr03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     102713407

SSDB

Motif

Pfam:

MAT1 NAD_binding_9

Other DBs

NCBI-GeneID:

102713407

NCBI-ProteinID:

XP_006662934

UniProt:

J3N8A6

LinkDB

Position

11:complement(10970500..10973421)

AA seq 193 aa
MVVVSSSGGGNAWAKEMTLRRRMASIFNKTQDHFPSLRDYNDYLEEVEDMTFNLIEGIDV
EEIEAKIARYQQENAEQIYLSRAKRAEDLAAALKASRMNPGKAGASDMAAGSSQGISSGT
GVQGQYAPAAVGMAQPRPTGMPPQPICGSSDPLQGDDEETMRLRAERGARAGGWTIEMGK
RRALEEAFSSIFI

NT seq 582 nt +upstreamnt +downstreamnt
atggtggtggtgtctagcagcggcggggggaacgcgtgggcgaaggagatgaccctccga
cgaaggatggccagcatattcaacaagacgcaggaccatttcccgtctctgagagattac
aatgattatctggaagaagttgaggatatgaccttcaacctgatcgaggggatagatgtc
gaggagattgaagctaaaattgccaggtaccagcaggaaaatgccgaacaaatatacttg
tctcgagctaaaagggctgaagatcttgccgctgcccttaaagcaagcagaatgaaccct
gggaaggctggtgccagcgatatggctgctggaagctcccagggcattagcagtggcaca
ggagttcagggccagtatgcgcctgctgctgttgggatggctcagccccggccgactggt
atgcccccgcaaccaatttgtggttcgtcagatcctcttcaaggagacgatgaggagacc
atgagactacgagctgagagaggagctcgagcaggtggatggactattgaaatgggcaag
agaagagcattagaggaagcgttcagcagtatattcatctga

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