Oryza brachyantha (malo sina): 102713775
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Entry
102713775 CDS
T02995
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102713775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102713775
03036 Chromosome and associated proteins [BR:
obr03036
]
102713775
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102713775
Coactivators
SAGA/TFTC/STAGA complex
102713775
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102713775
STAGA complex
102713775
TFTC complex
102713775
SAGA complex
102713775
SLIK complex
102713775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
102713775
NCBI-ProteinID:
XP_006644218
UniProt:
J3L0E5
LinkDB
All DBs
Position
1:complement(13426830..13434974)
Genome browser
AA seq
544 aa
AA seq
DB search
MSIVPKETIEVIAQSVGIANLPADVSAAVAPDVEYRLREIMQEAIKCMRHAKRTILTADD
VDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYVDDREVDFKEIIEAPLPKAPLDTAV
VAHWLAIEGVQPAIPENPPVDAIIAPTENKRTEHGKDDGLPVDIKLPVKHVLSRELQMYF
DKIAELTMSRSETSVFREALVSLSRDSGLHPLVPYFSYFIADEVTRSLGDLTVLFALMRV
VQSLLHNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWDLRDFSANLVASVCRRFGH
VYHNLQTRLTKTLIHAFLDPQKSLTQHYGAVQGISALGPSAIRLLLLPNLETYMQLLEPE
LQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPNLLSPSTRPLLRSNKRVVTNNP
NKRKSSSDLSASQPPLKKMATDGAMNSMASAPMQNMPGTMDGFSTQLPNPSMMQASSSGQ
LVESTASGVIRRDQGSNHPQKVSTVLRLAWKEDQNAGHLLSSLYEVFGEAIFSFVQPPEI
SLFL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagtgcccaaggagacgattgaggtgatcgctcagagcgtcggcatcgccaac
ctccccgccgatgtctccgccgcagttgctcctgacgtcgagtaccgcctccgcgagatc
atgcaggaggcaattaagtgtatgcggcatgcaaagaggacaatcctgactgcagatgat
gttgacagtgctcttagcctaagaaatgttgagcctgtatatggatttgcttctggtgat
cccttgcggtttaagagagctgtgggacacaaggatctcttctatgttgatgacagggag
gtagacttcaaagagattattgaggctcctctacctaaagctcctctcgatacagcagtt
gtagctcactggttagccattgagggagtccagcctgcgattccagagaatcctcctgtt
gatgctatcatagcgccaacggaaaataaaaggacagagcatgggaaggacgatggactt
cctgttgacataaagcttcctgttaagcacgtgttatctagagaactccagatgtatttt
gataaaatagcggagcttaccatgagtagatctgaaacctcagtttttagagaagcatta
gtgagcttatcgagagactcgggccttcatccattggttccttacttttcctacttcatc
gcggatgaggttaccaggagtttgggcgatcttactgttctatttgctctcatgcgtgta
gttcaaagcctcctccacaatccccacattcatattgaaccatatttgcatcagttgatg
ccatcaatgatcacttgcattgttgcaaaaaggcttgggcataggctttcagacaaccac
tgggatcttagggacttctctgctaatttggttgcttcagtttgccgaaggtttggtcat
gtgtatcacaacctccaaacccggttgacaaagacgttgatccatgcatttcttgaccct
cagaaatcattgacacaacattatggtgctgttcaggggatatctgcattggggcccagt
gcgattaggcttctgcttttgcccaacctcgagacatatatgcagcttttggagccagaa
ttacaacttgagaaacagaaaaatgagatgaaaagaaaggaagcatggcgtgtttatggt
gccctgctgtgtgctgcaggaaaatgcttatatgatcggctcaaattgtttcctaatttg
ctttctccgtcaacgcggcctcttttgaggagtaataagagagtcgtgactaataaccca
aataaaaggaagtctagttcggatctctctgcatcccagccacctctgaagaagatggca
acagatggtgcgatgaattctatggcttcagctcccatgcaaaacatgccaggaaccatg
gatggcttctccacccagttacccaaccctagcatgatgcaagcttcatcatctggacaa
ttggtggaaagcaccgcatcaggtgtgattcggagggatcagggaagcaaccacccgcaa
aaagtttccacagtgctgaggttagcctggaaggaggaccaaaatgctgggcatctgttg
agttcattgtacgaggtgtttggtgaagcaatcttctcctttgttcaaccaccagagata
tcgctctttttgtag
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