KEGG   Oryza brachyantha (malo sina): 102713965
Entry
102713965         CDS       T02995                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    102713965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:obr03400]
    102713965
DNA repair and recombination proteins [BR:obr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     102713965
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_TEP1_C Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_SCAP WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 ANAPC4_WD40 WD40_RFWD3 Beta-prop_Vps41 RAWUL Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 102713965
NCBI-ProteinID: XP_006663852
LinkDB
Position
12:complement(2605546..2614558)
AA seq 752 aa
MHRVGSAGNTAGSSRPRKEKRFTYVLNDADNKKHCAGINCLSYLKASTSGTSDYLFTGSR
DGTLKRWESKNGVPSFSATFESHVDWVNDAIVVGQNLVSCSSDTTLKVWNSLSDGACTRT
LRQHSDYVTCLAAAENNSNICASGGLGGEVFIWDLDSALAPVAKSVDAKEDETPNGNCGP
ALTTLCNVNSSSNLASTNGQSHGYSPIAAKGHKDSVYALAMNDTGTLLVSGGTEKVVRLW
DSRTGSKKVKLRGHTDNIRALLIDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYAVHTDSV
WALASTPSFTHVYSGGRDQSVYLTDLGNRESVLLCTNEHPVLQLSLQDDMIWVATTDSSV
HGWEAERENPENLFKKGGSFLAGNLSFSRARASLEGSAPVPIHKEPSSVMPGIPAIIQHE
ILNNRRHVLTKDTAGSVKLWEITRGAVIEDFGKVPFEDKKKELFEMVSIPAWFTMDARLG
CLSVHLDTPQCFSAEIYAVDLNVAGAQEDLKINLAQETLRGLLVHWSKRKQRSGSHGLSN
GDTSTGKDVSLRNLPHPRSEVDDGAENHASQMLPSFEFSTVSPPSIITEGSSGGPWRKRI
TDLDGTESDIPWWIVDCVEHNRFPKENTKCGFYLHPAEGSPAPNITQGKLSAPRILRIHK
VANYVVEKLDRPLDGNADSTFAMGLTSGQSQFSALDSSSRLGLKPWQKSKPSVEILCNSQ
VLLPEMSLATVRAYVWKKPEDLILNYRVVQSR
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgcatcgtgttgggagtgctggtaacacggcaggttcaagtcggccgaggaaggagaag
cgctttacgtatgtgctcaatgacgctgataacaaaaagcattgtgctgggatcaactgc
ttgtcatacctaaaagcatctacttctggcacaagtgattatctttttactgggagtcgg
gatggtaccttgaagagatgggagtcaaaaaatggagttccaagcttctcggcgactttt
gagtcacatgttgactgggttaatgatgccattgttgttggccaaaatcttgtttcctgt
tcctcagataccactctaaaggtttggaattctttgtcagatggtgcttgcaccaggact
ctccggcagcattctgattacgtgacctgtcttgctgcagctgaaaataatagtaatatt
tgtgcctctggtggccttggtggtgaggtctttatatgggaccttgattctgctcttgct
cctgtggccaaatctgtagatgcaaaagaggacgaaactcctaatggaaactgtgggcct
gctttgacaaccttgtgcaatgtaaattctagcagcaaccttgcttccaccaatggtcaa
tcacatgggtacagtccaattgctgccaaaggtcataaagattcagtttatgcattggca
atgaatgacacaggaaccttgcttgtctctggtggtactgaaaaggttgttcggctttgg
gactccaggacaggttcaaaaaaggtgaaattgagagggcacactgacaatatcagggct
ttacttattgactctactggcaggttctgtctttcaggctcatctgattcaatgataaga
ctatgggatctgggacagcagcgatgtgtgcattcttatgctgtgcatactgattctgtt
tgggcacttgcaagcactccttcgtttactcatgtttatagtggcggaagagatcagtcg
gtatacttgacagatttaggcaaccgagagagtgtcttactctgcacaaatgagcaccca
gtcctacaattgtccttgcaggatgatatgatatgggttgccacaactgattcttctgtg
catggatgggaagctgaaagggagaatccagaaaatcttttcaaaaaaggtggttcattc
ttagctgggaatttgtcattctccagggcaagagcttctttagaaggatcagcacctgtc
cctatacacaaagaaccatcttccgttatgcctggcattccagcaataattcagcatgag
atcctgaataatagaaggcatgtactgacaaaggacactgctggttcagtcaaattatgg
gagattactcgaggagctgttatcgaagactttggcaaggttccttttgaggataagaaa
aaagagttgtttgagatggttagtatacctgcctggtttaccatggatgctcgattggga
tgtctgtccgtccacctggatacacctcaatgcttttctgcagagatatatgcagttgac
ttaaatgttgctggagcacaggaagatcttaagattaatttggcccaggagactctccgt
ggtttgttagttcattggagtaaaagaaagcagagatctggttcacatggcttgtcgaat
ggtgacacttcaacaggaaaggatgtatccttgagaaatttgccacatccaagatctgag
gttgatgatggggctgaaaaccatgcaagtcagatgcttccctcatttgaattttctaca
gtttcacctccatcaatcatcacagaaggttctagtggagggccttggagaaagagaatt
acagatttggatggaactgagagtgatatcccatggtggattgtggactgtgttgagcac
aatcgatttccaaaagagaatacaaagtgtggattctatttgcatcctgctgaagggtca
cctgctccgaacataacacaagggaaacttagtgctccgcggatattgcggattcacaaa
gttgctaactatgtggttgagaaacttgatagaccactggacggaaatgctgacagcaca
tttgcaatgggattaacttctggccaatcacaattttcagcgctagatagttcatcacgg
cttggactaaagccatggcaaaaatcaaaaccgtctgtagagatattgtgtaacagccag
gttttgctgcctgaaatgagcttggccactgtgcgggcttatgtctggaagaagcctgag
gatttgattctgaactacagagtggttcaatcaagatga

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