Oryza brachyantha (malo sina): 102714038
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Entry
102714038 CDS
T02995
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102714038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102714038
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102714038
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102714038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
102714038
NCBI-ProteinID:
XP_006660627
UniProt:
J3MXG2
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Position
9:9191360..9192523
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AA seq
280 aa
AA seq
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MATPATEKPDGVEIREVWADNLEAEFLVIRDIVDRFPYVAMDTEFPGVVCRPLGTFKSAA
DFNYATLKANVDMLKLIQLGLTFSDERGGLPALGPEGRPCVWQFNFRGFDPRNDVAASDS
IELLRRSGIDFARHSADGADACRFAELLMSSGVVLNSEVRWVTFHSGYDFGYLLKLITGT
NLPDTISGFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSL
LTALSFKKLKESYFNGLTEKYAGVLYGLGTEGGETTSAAH
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggccaccgagaagcccgacggggtggagatccgcgaggtctgggcggac
aacctcgaggccgagttcctggtgattcgggacatcgtcgacaggttcccgtacgtcgcc
atggacacggagttccccggcgtcgtctgccgccctctcgggacgttcaagtccgcggcc
gacttcaactacgcgacgctcaaggccaacgtggatatgctcaagctcatccagctcggt
ctgaccttctcagacgagcgcgggggccttcctgctctcggtcctgaaggtcggccgtgt
gtttggcagtttaacttccgtggatttgatcctcgcaatgatgttgccgcgtcggattcc
atcgaactgctccgccggagcggtattgacttcgcacgtcactctgcggacggtgccgat
gcctgccgcttcgctgagctgctcatgtcctcgggtgttgtcttgaattcggaggtccgc
tgggttacctttcatagcggctacgactttggctacctgcttaagttgattaccggcaca
aacctgccggacacaatttccggattctttgacctcatcaggatatacttccctgttgta
tatgacatcaagcacttgatgcggttctgcaacagcctccatggtgggctgaacaagctt
gctgagctgcttgatgtcgagcgtgttggaatctgtcatcaggcggggtctgactcgctg
ttgaccgcgctctcattcaaaaagctcaaggagtcatacttcaatgggttaaccgagaaa
tatgccggtgtgttgtatggtcttggcacagagggtggggagaccacctctgctgctcac
taa
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