Oryza brachyantha (malo sina): 102714103
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Entry
102714103 CDS
T02995
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obr04131
]
102714103
Membrane trafficking [BR:
obr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102714103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
102714103
NCBI-ProteinID:
XP_006656547
UniProt:
J3MAJ7
LinkDB
All DBs
Position
6:complement(248291..255390)
Genome browser
AA seq
1442 aa
AA seq
DB search
MAMASDSDDADADFFDKLVDDDDAHTAAPSSQPEPDVAPPPPEAHAGPPPHHPPNAPAPQ
LRLPEAELEVALPPKVEGGSAKGVHTAVKQVQWTAFANTTGDDPFGEFMPAATEDAFFGG
NTDQATQPSVVATIGSMEHSFSSGVGNVANSHSGWAATATEFTDHNTNLHADSTSAAAVD
STPTDPKYLESLYPGWKYDEATQQWYQVDTYTAQSNADNLGTFGVDSVQQQQQQFGISYL
QNSSQAGLETIAEEGSTSWGLNESNTGATEYPSNMVFYAEYPGWYFDTTTQQWHSLESYQ
QVGVQTTTTAAALGGLVQTSDSYADDYSHQGQPQHVSLGYNNLAGSFYGSNQHADNQVGQ
QANVEPLESSNNHYTNINTYAHSTSQYTGSDDLQASHKGFGSSTSHQSSYKGFEPYTSHQ
CTSTGYHSGYKGSESSTVQPAIHQGFKPSTNSQNYKGFEPYSGHQSGYKGYEYSTDQIGQ
KEFGPSTDNQASHAAYGQVPSPYSSFNSVAKPQGSVPTSNMTHAQTHADSDGFMHFPNNY
SSTGNSINFAQQQFISSNSSLEQFGHSPHEQRSSAGRPPHALVTFGFGGKLVVVRETSSM
STNFDSGNQGNSSGVVSILDVSEIISAKVVHPSIPNGSALGYFHALCRQPIPGPLVGGSA
AAKDVNKWLDEIITGYDSSIREFQGGDDQKLLISLLKILCQHYGKLRSPFGSDPSQEGID
GPEMAVTKLFSSCKSSDAHKGEYGAIIHCMKNIPSDYQIQATAKEVQSLLVSGRRKEALQ
CAQEGQLWGPALILALQLGDKFYVDTVKKMAYHHFVSGSPLRTLCLLIAGQPADVFNVEN
PVDSNYGKLHIPQQSVESVNPRGMLDDWQENLAIITANRTKGDDLVITHLGDCLWKEKNE
VAAAHSCYLAAELNIEPYSENSRICLIGADHLRCPRTFASPEAIQRTEVYEYAKVLGNSQ
YILLPFQPYKLIYAYMLVEVGKVSDSLRYCQACLKVLKASGRAPELEAWKQLFSSLEERI
RTHQQGGYGTNLAPAKLVGKIFTSLDKSLSRMMGTQPSSLPPMPQGSSTERDSYSVPAAT
NFVNSQPAMAMSPLMSSVSEQSMSEMSGNSGPGKKVTHNRSVSEPDFGRNSNQGAASGNA
QSSSSSGSSRFGWLLQKTMGLVSRSHHQAKLGEQNKFYYDEKLKRWVEEGADIPAEEPPL
PPPPTKASFQNSVPDQNMNGPGNISYTANGISEARPLNPSEPSLGMPPMPPSQNQFSARG
RMGVRSRYVDTFNKGGANAAGPSYSKPATPSMNPLSGATFFVPSPATVGSEQIPDPTVNV
QQDQSSSLAVMRESSASPPPSVPSVPVQSSIQRYPSMDNIMTPSGSGNGSSFSRSRAASW
SGAYSEQLSSNAVSRSPDGQRTMMQSPLIPGQKHSHSRSSSNSSLQLNNNNGLGEDLHEV
EL
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcctccgattccgacgacgccgacgccgatttcttcgacaagctcgtcgat
gatgacgacgctcatactgccgccccttcttctcaaccggaacccgacgtcgcgccccct
ccccctgaggctcacgccggaccgccgccccatcatcctccgaatgctcccgcccctcaa
ctccgtctccctgaggctgagctggaggttgcgctgccacccaaggtagagggcggctcc
gccaagggtgtccacactgccgtcaagcaggttcagtggaccgccttcgccaacaccacc
ggggatgatccttttggggaattcatgcctgctgccaccgaagatgcgttttttggaggt
aatactgatcaggccacgcagccttcggttgtagctaccattggatccatggagcacagc
ttctccagtggagtgggtaacgtcgccaattcacactccggatgggccgctactgccacc
gagtttacggatcacaacaccaacctacacgcagattccacctctgccgctgctgtagat
tccacgcccaccgatcccaagtatttagagagcctctaccctggctggaagtacgatgaa
gcaacgcaacagtggtatcaggtcgatacttacaccgcacagagtaatgctgacaatctt
ggcacttttggcgttgatagtgttcagcagcagcagcagcagtttggcatttcttacttg
cagaactcttcacaggcaggcttggagaccatcgcagaggagggaagcaccagctggggc
ctgaatgagagcaatacaggagctaccgaatatccatcaaatatggtgttctacgctgaa
tacccaggatggtactttgataccactactcagcagtggcactcgctggagtcatatcag
caagttggcgtgcagactacaactactgcagcagctttaggtggattagtacaaaccagt
gattcttatgcagatgattatagccatcagggacaaccgcagcatgtttcattgggttat
aacaacttggcaggcagcttttatggttccaaccagcatgctgataatcaggttgggcag
caggctaatgttgagccactggaatcttctaataatcattataccaatatcaacacatat
gcgcattctacaagtcaatatactggtagtgatgacctccaagcaagtcacaagggattc
ggatcttccactagtcatcagagttcttacaagggttttgaaccatatacaagtcatcaa
tgtacttccaccggttatcatagtgggtacaagggctctgagtcttccacagtccaaccg
gctattcaccaagggtttaaaccatctacaaacagccagaattataaggggtttgagcct
tattcgggtcatcagtcgggttacaagggatatgaatattctacagaccagattggccaa
aaggaatttggaccttctacagataatcaagctagccatgcggcatacggacaggtacca
agcccttacagcagtttcaacagtgttgctaagccacaaggctctgttccaacatcaaac
atgacccatgcacaaacacatgctgattctgatggattcatgcattttccaaacaactac
tcgagcactgggaactccataaattttgctcagcagcagttcatcagttccaattcctca
cttgaacaatttggtcactcccctcatgagcagaggtcatcagctggacgcccgccacat
gctttggtcacatttggatttggggggaagcttgtagttgtgagagagactagctcaatg
tccacaaacttcgatagtggaaatcagggaaattcatctggcgtggtgtcaattcttgat
gtgtccgagatcatttctgctaaagttgttcatcctagcatccctaatggcagtgcactt
ggttacttccatgcgctatgccgtcaacctattcctggtccacttgttggtggaagtgct
gcagcgaaggatgtcaacaagtggcttgatgagattatcacaggctatgattcctctatc
agggagttccagggaggggatgatcagaagttgcttatttcattgcttaaaatattgtgc
caacactatggaaagctccgttcaccctttgggtctgatccatcgcaggagggtatagat
ggcccagagatggccgtgacaaaacttttctcatcttgtaagagcagtgatgctcataag
ggagagtacggagccattattcattgcatgaaaaatattccctcagattaccagattcag
gctactgctaaggaggttcaaagtctcctggtttctggtagaaggaaagaggctcttcag
tgtgcacaggaaggtcagctttggggacccgcattaatccttgctttacaacttggtgat
aagttttatgtggatactgtgaagaaaatggcttaccaccattttgtatctggatcacct
ttaaggacgttgtgccttcttattgctggacaacctgcagatgttttcaatgttgaaaac
cctgtcgacagcaactatggtaaattgcatataccccaacagtcggtagagtctgtgaat
cctaggggcatgttggatgattggcaagagaatttggctattataactgcgaacaggaca
aaaggtgacgatcttgtaattacccaccttggcgattgcctctggaaagagaaaaatgag
gttgcagctgctcattcatgctatttagctgcagaactaaatattgagccgtattcagaa
aattcaagaatttgtctaattggtgcagaccatttgagatgtcctcgtacatttgccagc
cctgaagctatccagagaacagaggtgtatgaatatgcaaaagttcttggtaattctcag
tacatcctcttgccatttcaaccatacaagcttatatatgcatacatgcttgtggaggtt
gggaaggtttctgattcactaaggtattgtcaagcatgcttgaaggtgctgaaagcatct
ggccgtgcacctgaattagaggcatggaagcagttgttttcatccctagaggagcggata
cgcactcaccagcagggtggatatggcacaaatctagcccctgcaaagcttgttggaaag
attttcacatcacttgataaatctttgtcccgcatgatgggtacgcagccttcatcattg
ccaccaatgccacagggctcctcaacagaaagagattcctattcagttcctgcagctaca
aattttgtgaatagtcagccagcgatggctatgtctcctttgatgtcttctgtttcggag
caatctatgagtgaaatgtcaggaaatagtggccctggcaagaaagtcacacataacaga
agtgtctctgaaccagactttggcagaaactccaaccagggtgcagcatcaggtaatgca
caaagctcatcaagttcaggcagttcacgtttcggatggttgctgcagaagacaatgggg
cttgtttcaagatctcatcaccaggcgaagctgggggaacaaaacaagttctactatgac
gagaagctgaagcggtgggtggaagaaggtgctgacatacctgctgaggagcctccccta
cccccacctccaacaaaagcctcattccagaacagtgttccagatcagaatatgaatggc
ccaggcaatataagttatactgctaatgggatttcagaagcaaggcctttgaatccttcg
gagcctagtttggggatgccaccgatgccacctagccagaaccaattctcagcacgtgga
cggatgggtgtcagatcaagatacgttgacacatttaacaagggtggtgcaaatgctgct
ggaccatcatatagtaaaccagccactccatccatgaatccactttctggtgctacattc
tttgtgccaagtccagctactgtcgggtcagagcagatccctgacccaacagtcaacgtc
cagcaggatcaatcgtcttccttggcagttatgagggaatcctcggcctcgccaccacca
tcagtaccatcagtgccagtgcaatcaagcattcagcggtatccgagcatggacaacatc
atgaccccatccggcagtgggaatggcagctcgttctcaaggtcacgagcagcatcatgg
agtggagcatattcagagcagctgagcagtaatgctgtttcgagatcgccggatggacaa
cggaccatgatgcagtctcctttgatacctggacagaagcattctcacagccgttccagt
agcaactcatccctacaactcaataataataatggcttgggcgaggatcttcacgaggta
gagctctga
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integrated database retrieval system
