Oryza brachyantha (malo sina): 102714204
Help
Entry
102714204 CDS
T02995
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00040
Pentose and glucuronate interconversions
obr01100
Metabolic pathways
Module
obr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102714204
Enzymes [BR:
obr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
102714204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
102714204
NCBI-ProteinID:
XP_006658431
UniProt:
J3MJQ1
LinkDB
All DBs
Position
7:4794013..4795904
Genome browser
AA seq
407 aa
AA seq
DB search
MASTVLNFSASLLTLFFFFLRSADAEIGSSNIFSMQSYGARGDGRHDDTKALVDAWAAAC
SSAKPAVVLIPKGKKYLTKHTTLSGPCKSSILLMVKGSLVASPERSDWSKETVKHWILFS
GVTSLTVTGGGTIDGNGKIWWQNSCKTNSKLPCTQAPTALTFYSCKNLKVENLKVVNSQQ
IQISVEDCTHVKMSRLSIFAPETSPNTDGIHITRSRDVQVADCTIKTGDDCMSIEDGTEN
LHVKNLVCGPGHGISIGSLGDHSSEDHVNNVTVDNVRMYGTTNGARIKTWQGGKGSAKNI
VFQNMIMDNVWNPIIIDQNYCDSSTPCKQQKSAVEVSNVLFKNIRGTSASEEAIMLHCSS
SVPCHAITLENVKLTVKGGSSDAKSTCQNAEWKKSGSVSPQPCGFSN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcctccactgttctcaatttctctgcatctctccttacgctgttcttcttcttcttg
cgtagtgcggatgccgaaattggtagtagcaatatattcagcatgcagagttacggggct
cgcggagatggacgccatgatgacaccaaggcattggtagatgcctgggctgcagcttgc
tcctctgcaaaacctgcagtcgttctcatccccaagggcaaaaagtacctcactaagcac
actacactgtctggtccatgcaaatccagcatcttgttgatggtgaagggtagtttggtg
gcctctccagagaggtcagactggagtaaggagactgtaaagcactggattctgttcagt
ggtgtcacaagtctaactgtcactggcggtgggaccattgatggaaatggcaagatctgg
tggcaaaattcatgcaaaacaaactcaaagctgccatgcactcaagctccaaccgcattg
acattctactcgtgcaagaatttgaaagtggagaacctaaaggtggtgaatagccagcaa
atccagatttcagtggaggattgcactcatgtgaagatgtctcgcttatcgatctttgcg
ccagaaactagcccaaacaccgatggcatccacatcactcgcagcagagatgttcaggtg
gccgactgcacaatcaagaccggggatgactgcatgtcgatcgaggatgggacagagaac
ctccatgtcaagaacttggtctgtggaccaggacatggcatcagcattgggagtttgggg
gatcacagctccgaagatcatgtcaacaatgtaaccgttgacaatgtcaggatgtacggc
acaacgaatggagctcgcatcaagacatggcagggaggaaagggttctgcgaagaacatc
gtgttccaaaatatgatcatggacaacgtctggaaccccatcatcatcgaccaaaactat
tgcgactcttctacgccctgcaagcaacagaaatctgcggtggaggtgagcaacgtgctg
ttcaagaacatcaggggcacaagtgcctcggaggaggccatcatgctgcattgcagcagc
agtgtaccatgccatgctataaccttggagaacgtcaagctcacagtcaagggaggaagc
agtgatgcgaagagcacctgccagaatgcagaatggaagaaatctggtagtgtcagtcca
caaccatgtggtttcagcaattga
DBGET
integrated database retrieval system