Oryza brachyantha (malo sina): 102714812
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Entry
102714812 CDS
T02995
Name
(RefSeq) protein argonaute 1A isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102714812
03036 Chromosome and associated proteins [BR:
obr03036
]
102714812
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102714812
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102714812
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
102714812
microRNA pathway
RISC loading complex
102714812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
102714812
NCBI-ProteinID:
XP_006648926
LinkDB
All DBs
Position
2:complement(20488063..20499156)
Genome browser
AA seq
1084 aa
AA seq
DB search
MHMAFHLDNVYYCHQALPMMRKRRTEPRDVGESSGTQQTTGGPGRGATQRPERAQQHGGG
GWQPANPQYSQHAGRGGGQHQGRGGRYQGRGGPTPQQPGGNPVEYQAHDYYGRGGQRQGG
MPQHRSGSGGRGFPASPSRTVPELHQASQVQYQAAVVTPSPSRTGPSSLPDEVSTDEVQQ
QFQELAIQGQSSTSQAIQPAPPSSKSVRFPLRPGKGTFGDRCIVKANHFFAELPDKDLHQ
YDVSITPEVPSRGVNRAVIGEIVTQYRQSHLGGRLPVYDGRKSLYTAGPLPFTSRTFDVI
LQDEEESPGVGQGTQRRERQFRVVIKFAARADLHHLAMFLSGRQADAPQEALQVLDIVLR
ELPTARYSPVARSFYSPNLGRRQQLGDGLESWRGFYQSVRPTQMGLSLNIDMSSTAFIEP
LPVIDFVAQLLNRDISARPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATR
ELSFPIDSHGTVKTVVQYFQETYGFNIKHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYS
KRLNEKQITALLKVTCQRPQDRELDILQTVHHNAYHQDPYAQEFGIRIDERLASVEARVL
PPPWLKYHDSGREKDVLPRIGQWNMMNKKMVNGGRVNHWTCINFSRHVQDNAARSFCREL
AIMCQISGMDFSVDPVLPPVTARPEHVERALKARYQDAMNILKAQGGELDLLIAILPDNN
GSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALTRR
IPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQD
LFKVWKDPQRGTISGGMIRELLISFKRSTGQKPQRIIFYRDGVSEGQFYQVLFYELDAIR
KACASLEADYQPPVTFVVVQKRHHTRLFANNHKDQRTVDRSGNILPGTVVDSKICHPTEF
DFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYA
HLAAFRARFYMEPDTSDSGSMASGAHTRGGGPPPGARGGKAAGNVAVRPLPDLKENVKRV
MFYC
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgcacatggccttccatttggacaacgtgtattactgccatcaagctttacctatgatg
agaaagagaagaactgaaccccgtgatgttggggaaagttccggaactcagcaaaccact
ggaggccctggacggggtgcaacacaacgaccagagagagctcaacagcatggaggtggt
ggttggcaacctgcgaatcctcaatattctcaacatgctggtcgtggtggtggacaacac
cagggacgtggtggacgttaccagggtcgtggagggccaacaccacaacaaccgggtggt
aatccagttgaatatcaagcacatgactactatggccgtggtggccaacggcaaggagga
atgccacaacacaggagtggcagtggtggacgtggatttcctgccagtccatcaagaaca
gttcccgagctgcaccaagcctcacaagtccagtaccaagctgcggtggttacaccgtca
ccatcaagaactggcccatcttcgctgcctgatgaggtcagcaccgatgaagtccaacaa
cagtttcaagaacttgctatccagggtcaaagctccactagccaggccattcaacctgca
ccaccgtcgagcaaatccgtgagattcccattgcgccctggcaagggtacgtttggtgat
cggtgcatcgttaaagcaaaccatttctttgctgaacttcctgacaaagaccttcatcag
tatgatgtgtctataactccggaggttccttcgcgtggtgtcaatcgtgctgtcattggc
gaaattgtaacacagtataggcagtctcacttgggtgggcgtcttccagtttatgatgga
aggaagagcttatacacagctggtccattaccatttacttctaggacctttgacgttatt
ctgcaggatgaagaagagagccctggtgttgggcaaggcacacagaggcgtgagagacaa
tttagggtcgtgatcaaatttgctgcacgcgctgatctccaccacttagccatgttttta
tctgggaggcaagcggatgctcctcaagaagctcttcaagttcttgacattgttctacgt
gaattgcccactgcaaggtattctccagttgcaaggtcattctattcgccaaacttaggg
aggcgccaacagcttggtgacggcttggaaagttggcgtggtttttaccaaagcgtacga
cccacacagatgggactttcactgaatattgatatgtcatctacagcattcatcgagcct
ctacctgtgattgattttgttgcacagcttttgaacagagacatctcagctagaccgtta
tctgatgctgatcgtgttaagatcaagaaggccttacgaggtgtaaaggttgaggtgaca
catagaggcaatatgcgcaggaagtatcgcatttctggccttacctcacaagcaacgcga
gagttgtccttccccattgatagtcatggtactgtgaagacggtggtgcaatacttccag
gagacatatggcttcaacattaagcacaccactttaccttgcttgcaagtggggaatcaa
caaaggccaaattatctaccaatggaggtctgtaagattgttgagggacagcgttactca
aaaagactaaatgagaagcagataactgctcttcttaaagtgacctgccagcgccctcaa
gatcgtgagctggacattttacagactgtgcatcacaatgcataccatcaggatccatat
gcgcaggagtttggcataaggattgatgagcgacttgcttcggttgaagctcgtgttcta
cctcccccctggctcaagtaccatgacagtggcagagagaaggatgtcttgccaagaatt
ggccaatggaacatgatgaataagaaaatggtcaatggtggcagagttaaccactggacg
tgcatcaatttttctcggcatgtccaagataatgctgcgagaagtttctgtcgcgagctt
gctattatgtgccaaatatctggcatggacttttcagttgatcccgtgcttcctccagta
actgcaagacctgagcatgtagaaagagcactcaaagcacgctatcaagatgccatgaat
atactgaaagcacagggtggggagcttgacctactgattgcaatattgcctgacaataat
gggtctctttatggtgatctcaaaagaatatgtgagactgatcttgggttggtctcgcaa
tgctgtcttacgaagcatgtttttaagatgagcaaacaatatttggcaaatgttgccctt
aaaatcaatgttaaggtaggaggaagaaatactgtacttgttgatgctttgacaaggaga
atccccctagttagtgatcggccaactatcatatttggtgctgatgttacgcatcctcat
cctggagaagattctagcccttccattgcagctgttgttgcgtctcaagactggcctgag
gtcactaaatatgctgggttagtgagtgcacaggcccatcgtcaggagttgatacaggac
cttttcaaagtatggaaagatccgcaaagagggactataagtggtggaatgatcagagag
cttctcatttctttcaagaggtcaactggacagaagccacaaaggattatattttacagg
gatggtgtcagtgaaggacagttctatcaggttctgttctatgagcttgatgctattaga
aaagcgtgtgcatctttggaagctgattatcagccgcctgttacctttgtggtggtccag
aagcgtcatcatacacggctgtttgctaataaccacaaggaccaacgcactgttgataga
agtggaaatatactaccgggcaccgtggttgattctaagatatgccatcctactgaattt
gatttctacctctgtagccatgctggcattcagggaacaagtcgccctgcacattatcat
gttctgtgggatgagaacaaatttactgctgatggtttgcaaactctgacaaacaacctg
tgctacacctatgccaggtgcacccgttctgtatcaattgttcctcctgcatactatgcc
catcttgcggcttttcgagctcgattttacatggagccggatacttcagatagtgggtcg
atggcgagtggtgcccatacccgtggtggtggcccccctcctggtgcacgcggcggcaag
gctgctgggaatgttgctgtaaggccgcttcctgatctgaaggaaaatgtcaaacgtgtc
atgttctactgctaa
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