Oryza brachyantha (malo sina): 102714845
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Entry
102714845 CDS
T02995
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obr03009
]
102714845
Enzymes [BR:
obr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102714845
Ribosome biogenesis [BR:
obr03009
]
Eukaryotic type
90S particles
Helicases
102714845
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
Cas3-like_C_2
P-loop_SecA
DUF3682
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
102714845
NCBI-ProteinID:
XP_006658049
UniProt:
J3MNK7
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All DBs
Position
7:17492555..17495907
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AA seq
544 aa
AA seq
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MEKAKLSSALFAGTHFNRKRFANDFARFRQGPSAPDVDSAAASSAPSPEKKRKRKSKAKA
KKNKKKRAEEAASASDVVEGFSVFKGLAAKKEEEEESEKKAERGKSEDSEVERRRKEVER
EIERAAILRKRFDIHISGQNVSAPLENFEELVSRYDCDSYLVGNLSKLGFQEPTPIQRQA
IPILLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELALQTARECK
KLAMGRKFYIKVMTKDMSKSGNFKDMHCDILVSTPLRLDHAVQKRDLDLSRVEYLVLDES
DKLFELGFVEVIDSVVKACSNPSIIRSLFSATLPDSIEALARTIMHDAVRVIVGRKNSAS
SLIKQKLIFAGTEKGKLLALRQSFAESLNPPVLIFVQSKERAKELYKELAFDDVRADVIH
ADLDDQQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESASAYIHRIGRS
GRAGRSGEAITFFTEEDKPFLRNIANVLISSGCEIPSWIKALPKLKRRKHRVNRDPISTL
PDED
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcgaaactctcgtcggcgctcttcgccggcacccacttcaaccgcaagcgc
ttcgccaacgacttcgcccgcttccggcagggcccatctgccccggacgtggactccgcc
gccgcctcctccgcgccgtcgccggagaagaagcggaagcgcaagagcaaggccaaggcg
aagaagaacaagaagaagcgggcggaggaggccgcctctgcttccgatgttgtggaagga
ttcagtgtgttcaagggattggcggctaagaaggaggaggaggaagaatctgagaagaag
gcggagagaggtaagagcgaggattcggaggttgaaaggcggcggaaggaagtcgagaga
gaaatcgagagagcagccatactccggaagaggtttgacatccacatttcgggacaaaat
gtttcagcaccactggagaactttgaggaactggtttcaaggtatgattgcgattcatat
ttggtcggtaacttgtcaaaacttggatttcaagaacccacacctatccaaaggcaggcc
attcccattcttctatcggggagagagtgttttgcctgtgcccctacaggttctggcaag
actttggctttcttgttccctatcctgatgaaaatcaagccaggatctaaagagggtgtt
aaagctgtgatcctttgcccaacaagagaattggcattacaaactgcaagagagtgcaag
aagttagcaatgggaaggaaattctatattaaagtaatgacgaaagatatgtcaaaatct
gggaatttcaaggatatgcattgtgacatcctggtctccaccccgcttcgtctggaccac
gctgtacaaaagagagatcttgatttaagtagagtggaataccttgtcttggatgaatct
gataaactttttgagcttggattcgttgaagtgattgattcagttgtcaaagcctgctca
aatccttcaataattcgatctctgttcagtgccactttgcctgattcaatagaagcgctt
gcacgcacaataatgcacgatgcagttcgagtcattgtgggaagaaagaattcagcctct
tcactgattaagcaaaagttaatttttgctggaactgagaaggggaagttgctagctctt
cgccagagctttgcagaatctctcaatcctccagtattgatctttgttcaaagcaaagag
agggcaaaagagctttacaaagaactggcgtttgatgatgtacgagctgatgtaattcac
gctgaccttgatgaccaacagcgccaagatgctgttgacaacttaagagccggaaaaact
tgggtactgatagcaacagaagtcattgcccggggaatggatttcaaaggtgttaactgt
gtgatcaactatgattttccagagtcagcttctgcctatattcacagaataggacgatct
ggaagagcaggtagatctggggaggccatcacattcttcaccgaggaggataagccattt
ttgcggaacatcgcaaacgtgctaatatcttcagggtgtgagattccttcttggataaag
gcgctgccaaagctcaagcgcaggaagcacagggtgaaccgggatcccatctccacctta
ccagatgaagattga
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