KEGG   Oryza brachyantha (malo sina): 102714936
Entry
102714936         CDS       T02995                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like isoform X1
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
obr  Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:obr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:obr03009]
    102714936
Ribosome biogenesis [BR:obr03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    102714936
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_TEP1_C EIF3I NBCH_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_IP5PC_F WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_VPS8 WDR54 Beta-prop_Nup120_160 LCE6A
Other DBs
NCBI-GeneID: 102714936
NCBI-ProteinID: XP_015694900
UniProt: J3MK67
LinkDB
Position
7:7112276..7117675
AA seq 422 aa
MAPPQQLVLAASSADAGVAAWDLRTGAEAIRHRTCASRPRSLAVVADRFLAAAQAPAGNS
APIHYYHWDKPQVAVKSFPVEPIRALIADPEGSYLIGGGVSGDIFFWEVASGELLVQWHA
HYRAVRCLALYDFLLVSGSEDGSIKVWDLLTMLDEQSRLEAKTQHIYSLNQHALPVTDVA
CFHGANAVSSSEDRTCKIWSLSEGRMLRSILFPAIIDSIALDPRSHIFYAGGRDGKIYVT
AMGVEVTSPSSDDSSIIGALDDHSKAVTSLASSTDGLVLISGSEDGNVRVWDTRSQQVIR
KFKHSQGPVTNVLLVTPKRVNLPSLQSLRKVSSANGESESRAVIVPQPENDVHIAGNSSS
NFLECCLDALQPGGSSRLFESGASTLCGAPNQQGVEWRSKYLELQDLFVREVLDQMPSSK
NT
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcgccgccgcagcagctggtgctcgcggcctcctccgccgacgccggcgtggccgcg
tgggacctccgcacgggcgccgaggccatccgccaccgcacctgcgcctcccgtccgcgc
tccctcgcggtcgtcgccgaccgcttcctcgccgccgcccaggcccccgccggcaactcg
gcccccatccactactaccactgggacaagcctcaggtggccgtcaagagcttccccgtc
gagccgatacgcgcgctcattgctgacccagaggggagctacctcatcggcggtggggta
tccggcgacatattcttttgggaggtggctagtggggagttgcttgtccagtggcatgca
cattatcgtgctgttaggtgccttgcgctctatgactttttgcttgtctcggggtctgaa
gatggtagcatcaaagtttgggatctcctcacgatgcttgacgaacaatcaagattagag
gcaaagacacaacacatatatagccttaaccagcatgcactgcctgtaactgatgttgct
tgctttcatggagcaaatgctgtatcatcttcagaggatcgcacctgtaaaatttggagt
ctatctgagggtaggatgctaagaagcattttatttcctgctattatcgattctattgcg
ttagacccaagaagtcatattttctatgctggtggtagagatggaaagatatatgttact
gctatgggagttgaggtcacctctcctagtagtgatgattcatctattattggggctttg
gatgaccacagcaaggcagtaaccagcttagcatcgagcactgatggacttgtattgatc
tctggatctgaggatggtaatgttcgagtttgggatacaagaagtcagcaagtaatccga
aagttcaaacattcccaaggtccagtgacaaatgttctcttagtaacgccaaaacgagta
aatcttccatcgctacagtcactacgtaaagttagctcagcaaatggagaatctgaatca
cgggctgtaattgtgccccagcctgaaaatgatgtccacattgctggaaactccagttcc
aactttctggagtgctgcctggatgcacttcagcctggtggttcgtctagattgtttgaa
tctggggccagtactctttgtggtgcaccaaaccaacagggtgtagaatggaggagtaaa
tacttggaattacaggacctctttgtgcgtgaggttcttgatcagatgccgtcttcaaag
aatacataa

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