Oryza brachyantha (malo sina): 102714952
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Entry
102714952 CDS
T02995
Name
(RefSeq) uncharacterized protein LOC102714952
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102714952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102714952
03019 Messenger RNA biogenesis [BR:
obr03019
]
102714952
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102714952
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
102714952
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_PCFS4
CID
HVO_2901
Motif
Other DBs
NCBI-GeneID:
102714952
NCBI-ProteinID:
XP_040383429
LinkDB
All DBs
Position
9:complement(15184796..15190963)
Genome browser
AA seq
1055 aa
AA seq
DB search
MRASSAPMEPSSAPRRSAAPDPKKPRLAQHPPPPPAPAPRDPRSYAAANGAVDQAQVDEL
VVQYRAALAELTFNSKPIITNLTIIAGENLHAAKPIASLICANILEVPSEQKLPSLYLLD
SIVKNIGKDYVKHFSARLPEVFCKAYRQVDSSIHNSMRHLFGTWKGVFSPASLQLIEKEL
GFQSSTNGSSGAAPSKPDSQSNRPSHSIHVNPKYLEARQQLQPNKGILGAGAKTTTVSDS
GDDIERTSRTTIDRGAGRRLDALNSRPRAQRDPFSNPIHEKQDRDMRAVGFSNISQQPVV
VTAQVRSKPKGQDGSGGPYYTAGVGSSEEQFDRRSSFYANKDVKPSGSARLDTALLPTPV
SNSDRIGRQSSNKSWKNSEEEEYMWDDVRFQGADYGGTSSTRKREWMPDDGNVGNFQRVK
WAEAGGPLDPDLHKLDNFQRFGSAMGQDRRTAPYMDHEEDLHGKREVEPRIDRDMLPEGQ
LLSSSRGSSLWLSQEKPVPGIGSDPRISTFSNQPADRSTIYPATLSTSITSSVPVGLSGA
YAGRSSLEHANIVPTRSTETIAQQKNRYWSASSPPIQSTPASFVRQNSPSPAEVDYPSRP
FSQLGQNPPEDYNQRAHALAQNAALSQGRPNLLGGPSQASQQIEKHPALQSKQHIKPPDQ
LQASFSLENSSSLFKPSIQLPISVGMGHQQPEEVSLPSASTLMSSDHLSASNLLAGLIKS
GFKPNEQPPLPSGPPPHVSTSLPASSSSIHLPVSDTLKPQSSNSQRPPLPPGLPLSLPFV
CPTTQTSEKAAPLTSLLSSLVAKGLISSPSTDSTVAVSQQPSKSDLNTPDLTTSAPSLPF
VQPSVKKETAHQNSSAPTKAQVPQPAEVKVKPAEIKMLDLIGFEFKPEMLRKYHEHVIST
LFDDQSHQCNTCGLRFRLEEELSVHTACHESKQTEAKNIGIAPEKWYPSKNSWIDRSNEV
QNSVLESASSDADLTSEDEACELMVPADESQIICVLCGERFDDIYSAEKDSWMYKDAVYF
DSPKIEGSSGDSAESKGRVPIVHARCMSNDGMEVD
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcctcctccgcccccatggagccctcctccgcccctcgcagatccgccgccccc
gaccccaagaagcctcgcctcgcccagcacccgcctcctccccccgcccccgcccccagg
gatcccagatcttacgccgctgccaatggcgccgtcgaccaggcgcaggtggacgagctc
gtcgtgcagtaccgggccgctctcgcggagctcaccttcaactccaagcccatcatcacc
aacctcaccatcatcgccggcgagaacctccacgccgccaagcccatcgcctccctcatc
tgcgccaacatcctcgaggttccaagtgaacagaagctaccatctctttatctactcgac
agtattgtcaaaaatattggaaaagattatgttaaacatttttctgcaagattacctgag
gtgttttgcaaggcatataggcaggttgattcttctatacacaatagcatgaggcaccta
tttggaacatggaaaggagtgttttctccagcttcactccaattgattgagaaggaactt
ggctttcaatcatctaccaatgggtcatcaggcgctgcaccatcaaagcctgattctcaa
tccaatcgtccatcccatagtattcatgtgaacccaaaatatttggaagcaaggcaacag
ctccaaccgaataaggggatactgggagctggtgctaagactactaccgtttctgattcc
ggtgatgatattgagaggactagcaggacaactattgatagaggtgcagggcggcggctg
gatgctttgaactctaggcctcgggcacaaagggacccttttagcaatcctattcatgaa
aagcaagatagagatatgagggccgttggattctccaacatttcacagcagcctgttgtg
gtaactgctcaagttcgctcgaaacctaaaggtcaagatggaagtggcggaccatattat
actgccggggttggttcttctgaagaacagtttgacaggcgcagcagtttttatgcaaac
aaggatgttaaaccatcagggtctgcacgtctagatactgcacttctcccaactcctgtt
agtaattctgacaggattggtaggcagtcatctaacaaaagctggaagaattctgaggaa
gaagagtacatgtgggatgatgtgcgttttcaaggagcagattatggaggtaccagttcc
acaagaaaaagagaatggatgcctgatgatggaaatgttgggaactttcaaagggttaaa
tgggcagaggcgggaggacctttggatcctgacttgcacaaactagacaacttccaaaga
tttggaagtgcaatgggtcaagatagaagaactgcaccatatatggatcatgaagaggac
cttcatggtaagcgtgaggtggaaccaagaattgatagggatatgctccctgaaggacaa
ctgttgtcgtcgtctcgtggttcctctctctggttatcacaggaaaaacctgtcccaggc
attgggtcagatcctaggatatcaacattttccaatcagccagcagataggtctaccatt
tatcctgccaccttgtcaacaagcatcacttcatctgtacctgttgggctgtcaggagca
tatgctggacgatcaagcctagaacatgcaaatatcgtaccgacaagatcaactgagact
atagcgcagcaaaaaaatagatattggtcagcttcctcgccaccaatccagtcaacacct
gcatcctttgtacgccagaattccccaagtcctgcagaggttgattacccttccagacca
ttctcacaattgggccaaaatcctcctgaagactataaccaaagagctcatgccttggct
caaaatgccgcactttctcagggcagacctaatcttctgggtggcccttcacaagcttcc
cagcagattgaaaagcaccctgcattgcagtcaaagcaacatatcaaaccacctgatcaa
ctgcaggcaagcttttcacttgaaaattcatcttcactatttaaaccttcaatccagctg
cctatttctgttggcatggggcatcagcagcctgaagaagtatctttgcccagtgcttct
actcttatgagctcagatcatttaagtgctagtaatttgttggctggccttataaagagt
ggattcaaaccaaatgagcaacctcctcttccaagtgggccacctcctcatgtttctaca
tctcttccagcttcttcgtcatcgatacaccttccagttagtgatactttgaagcctcag
tcatcaaactctcagcgcccaccgttgccaccaggattgccactctctttgccatttgtg
tgcccgacaacacagacttcggagaaagctgcaccactcactagtcttctcagttccctg
gttgcaaagggattaatttcttcaccttctactgattcaactgttgcggtctcacaacag
cctagtaaatcagatctgaacacaccagatcttactacttcagctccatccttgcccttt
gtccagccttcagttaaaaaggaaacagcccaccaaaattcatctgccccaactaaagct
caggtaccccaacctgctgaagtcaaggtgaaacctgcagaaatcaaaatgttagacctc
attggctttgagttcaagcctgagatgcttcgcaagtaccatgaacatgtgatcagcacc
ctctttgatgaccaaagtcatcaatgtaatacatgtggtctaagattcagacttgaagaa
gagctctctgtgcacactgcatgccacgagtcgaagcaaactgaggctaaaaatattggt
atcgcacctgaaaaatggtaccctagcaaaaacagttggattgatagatcaaatgaagtg
cagaatagtgtcctggaatctgcttcttcagatgcagatttgacctctgaagatgaagct
tgtgagttaatggttcctgcagatgagagccagattatctgtgtactttgtggagagcga
tttgatgacatttattctgccgagaaggatagctggatgtacaaggatgcagtatatttt
gattccccaaagatagaaggcagcagtggggacagtgctgagagcaaaggccgtgtaccc
atagtccatgcaagatgtatgtcgaatgatggcatggaggttgattag
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integrated database retrieval system
