Oryza brachyantha (malo sina): 102715025
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Entry
102715025 CDS
T02995
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102715025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102715025
03110 Chaperones and folding catalysts [BR:
obr03110
]
102715025
03029 Mitochondrial biogenesis [BR:
obr03029
]
102715025
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obr04147
]
102715025
Enzymes [BR:
obr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
102715025
Messenger RNA biogenesis [BR:
obr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
102715025
Chaperones and folding catalysts [BR:
obr03110
]
Heat shock proteins
HSP60 / Chaperonin
102715025
Mitochondrial biogenesis [BR:
obr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
102715025
Exosome [BR:
obr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102715025
Exosomal proteins of other body fluids (saliva and urine)
102715025
Exosomal proteins of breast cancer cells
102715025
Exosomal proteins of colorectal cancer cells
102715025
Exosomal proteins of bladder cancer cells
102715025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
102715025
NCBI-ProteinID:
XP_006655538
UniProt:
J3M9A3
LinkDB
All DBs
Position
5:complement(17803717..17808397)
Genome browser
AA seq
578 aa
AA seq
DB search
MYRAAAAAISRSSSALRKQLVRRGGEQRLWARGYAAKEVAFGVGARAAMLQGVNDLADAV
KVTMGPKGRNVIIERSHGTPKVTKDGVTVAKSIEFEDSTKNVGANLVKQVAEATNKVAGD
GTTCATVLTQAILTEGCKAVAAGVNVMDLRNGMNKAINSITTHLKSKAWIINSSEEINQV
ATISANGEKEIGDLISKAMEIVGKDGVITITDGKTLDNELEAVQGMKLSRGYISPYFVTD
QKTQKCEMENPLILIHDKKISTMNSLLPVLEMSIKNRRPLLIIAEDVEGEALSMLVLNKH
RAGLKICAVKAPGFGENRRANLDDVAVLTGGEVVSEDRGIDLGKVQLQMLGTAKKVTVSL
DDTIILDGGGDRQQIEERCKQLRESIDKSTAVFDKEKAQERLSKLSGGVAVVKIGGASEA
EVGEKKDRVTDALHAARAAVEEGIVPGGGVALLYATKELDKIITATNEDEKIGVQIIKNA
LKAPLMTIAANAGIDGGVVIGKLIEQDNLNLGFDAARGEYVDMIKAGIIDPVKVIRTALQ
DAASVSLLMTTTEAAVAELPATKARIASRMPQMSGMDF
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcgcggcggcggcggccatttcgaggtcctcctcggcgctgcggaagcagctc
gtgcgccgcggcggcgagcagcggctgtgggcgcgggggtatgcggcgaaggaggtggcc
ttcggggtcggcgcgcgggccgccatgctgcagggcgtcaacgaccttgccgacgccgtc
aaggtcaccatgggtcccaaggggcgcaatgtgattattgagagatcccatggaactccc
aaagtcacaaaggatggagtcactgttgcaaaaagcattgagttcgaggacagcactaag
aatgttggtgcaaacctggtgaagcaagtcgctgaagctactaataaggtcgcaggagat
ggtacaacttgtgcaactgtacttacacaggcaattcttacggaaggttgcaaggctgtg
gcagcaggggtaaatgttatggacttgcgtaatggcatgaacaaagctataaactctatc
actacacacctcaaaagtaaagcatggattatcaactcctcagaagaaataaatcaggta
gcaaccatttctgcaaatggagaaaaggaaataggagatttgatatcaaaggcgatggaa
atagttggaaaagatggcgttattactattactgatggcaagacattagacaatgagctt
gaagcagtacagggaatgaaactgtccagaggctacatatctccttactttgtgactgat
cagaagactcagaagtgtgagatggaaaatcctctgattctaattcatgacaagaaaatc
tcaacaatgaattcacttcttccagtattagaaatgtctatcaagaatcgtagacctctt
ctcatcattgctgaggatgttgagggagaagctctatcaatgcttgtactgaacaagcat
cgtgctggattgaagatatgtgctgtcaaagctcctggatttggtgaaaacagaagagcc
aatctggatgatgtggctgtgttgacaggaggagaggttgtcagtgaggaccgaggtatt
gatcttggtaaagtccaactacagatgcttggcactgctaaaaaggttactgtatccctt
gatgatactatcattctagatggtggaggtgacagacaacagatagaggagaggtgtaaa
cagcttagagaatcaattgacaaaagcactgctgtattcgacaaagaaaaggctcaagaa
cgtctatcaaagttatctggtggtgttgctgtcgtcaagatcgggggagctagcgaagct
gaagttggtgaaaagaaagatagggtaacagatgctctacacgcagcaagagctgctgtg
gaggagggcattgtaccaggtggtggagttgcccttctatatgccaccaaggagcttgac
aagattatcacagcaacaaatgaggatgaaaagattggtgtccaaattatcaaaaatgcg
ttgaaggcccctttgatgactatagctgcaaatgctggcattgatggtggtgtagtcatt
gggaagctaattgaacaagataatcttaatttgggctttgatgcagcaagaggggagtat
gtcgacatgattaaggctggcatcatcgaccccgtgaaagtcatccgaacagcactacaa
gatgcagcaagcgtttctttgctgatgacaacgacagaggcagctgttgctgagcttcca
gcaacaaaagccagaattgccagtcggatgccgcagatgagcgggatggatttttga
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