Oryza brachyantha (malo sina): 102715072
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Entry
102715072 CDS
T02995
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00061
Fatty acid biosynthesis
obr00071
Fatty acid degradation
obr01100
Metabolic pathways
obr01212
Fatty acid metabolism
obr04146
Peroxisome
Module
obr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
102715072
00071 Fatty acid degradation
102715072
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
102715072
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
obr01004
]
102715072
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obr04147
]
102715072
Enzymes [BR:
obr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
102715072
Lipid biosynthesis proteins [BR:
obr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
102715072
Exosome [BR:
obr04147
]
Exosomal proteins
Exosomal proteins of breast milk
102715072
Exosomal proteins of breast cancer cells
102715072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
102715072
NCBI-ProteinID:
XP_006663856
UniProt:
J3NBQ5
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All DBs
Position
12:2712908..2718052
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AA seq
698 aa
AA seq
DB search
MNPYFVGLLVPIAVSLLLQKRRKTHKMRGVPVDVGGEPGYAIRNYRFEHPVETHWEGITT
LAELFEQSCKEYLHMPLLGTRKLISREKELSSDGRSFEKLHLGEYEWKRYAEVFKSVCNF
ASGLIRLGHEKSERVAIFAETRAEWQVALQACFRQNITVVTIYASLGEEALCHSLNETEV
TTVICGQKELKKMIDISTQLDTVKRVIYINEEGISAEVSLAQNSTSWIIEPFEEVDRLGN
EAPVDANMPLPSDVAVIMYTSGSTGLPKGVMMTHRNVLATLSAVMTIVPHICRKDIYLAY
LPLAHILELAAEALMSAVGASIGYGSPLTLTDTSNKIKKGTLGDASALKPTLMTAVPAIL
DRVRDGVRKKVDAKGGVAKQLFDVAYNRRLAAVNGSWLGAWGLEKLLWDMLVFKKVRAIL
GGKIRFVLSGGAPLSGDTQRFINICLGVPIGQGYGLTETCAGGTFSEYDDPSVGRVGAPL
PCSYIKLIDWSEGGYLTSDSPMPRGEIVIGGPNVTKGYFKNDAKTNEIYKVDERGMRWFY
SGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIASPYVENIMIHADPFHSYC
VALVVAAHNELENWASQQGVTYTDFAELCQKPEAVKEVLGSLSKAAKQARLEKFEIPTKI
KLVPEPWTPESGLVTAALKLKREVIRKTYENDLAEFYA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttatttcgttggtcttcttgtacccatcgcggtctctcttctactccagaaa
aggaggaaaactcacaagatgagaggagtgccagttgatgtgggtggagagcctggttat
gcaatacgcaactatcgatttgaacatccagttgaaactcactgggaagggatcaccaca
ctcgctgagctctttgagcagtcatgcaaggagtatctccacatgccactccttggcacc
aggaagctcatttccagggaaaaggaattatcatctgatgggaggtcctttgagaagctt
catcttggagagtacgagtggaaacgctatgctgaggtcttcaagagtgtttgcaacttt
gcgtctggcctaattcgattaggccatgagaagagtgagcgtgttgctatttttgctgag
acacgggctgagtggcaagttgctctgcaggcatgcttcaggcaaaatattacagttgtc
acaatctatgcctcattgggggaggaagcactgtgccactcactaaatgagactgaggtt
actactgtcatatgtggtcagaaagaactgaaaaaaatgattgatataagtacacagctt
gacacagtaaagcgagttatctatatcaacgaggaaggaatttcagctgaagtttcgtta
gctcaaaacagcactagctggataattgagccgtttgaggaagtagatagattgggaaat
gaagcacctgttgacgcaaacatgcctctcccatctgacgtagcagtgataatgtataca
agtggtagcactggattgcctaagggagttatgatgactcaccgtaatgtcctggctaca
ctttcagcagttatgaccattgtgcctcacatttgtaggaaggatatatacctggcctac
ctgccacttgcacacattcttgagttggcagctgaggcactcatgtctgctgttggggct
tccataggatatggatcacctctgaccctgactgatacatcaaacaaaataaaaaagggc
acactaggtgatgcttctgcactcaagccaacattgatgaccgctgtacctgctatactt
gatcgtgttcgtgatggtgtgagaaaaaaggtggatgcaaagggtggtgtagcaaagcag
ttattcgatgttgcctataaccgtcgacttgctgcagtcaatggaagttggctgggtgca
tggggattagagaaactcttgtgggacatgcttgtcttcaaaaaggtgcgtgcaattttg
ggaggaaagattcgctttgtactttcaggcggagcacctctatcaggtgatacccagaga
tttatcaatatatgcctcggggttccaatagggcaagggtatggtctgactgagacatgt
gctggaggaacattttccgagtatgatgacccatctgttggtcgtgttggtgctccacta
ccttgttcgtacatcaagctgattgactggtcagaaggtggatacttaacaagtgactcc
ccaatgcctcggggagagattgtcattggtggtcctaatgtaactaaaggctatttcaag
aatgatgctaaaacaaatgaaatctacaaggttgatgaaagaggtatgcgatggttctac
tctggtgacatcgggcgcttccacccagatggctgccttgaaatcattgaccgtaaaaag
gatattgtgaagcttcaacatggtgaatatgtgtctctcgggaaggtggaggctgctctg
attgcgagcccatatgtggagaacatcatgattcatgctgatcctttccacagttactgt
gttgcgcttgtggtagctgcacacaatgagctggaaaactgggcttcacagcagggagtg
acatatactgatttcgcagaattatgccagaagccagaggctgttaaagaagtgcttgga
tcattatcaaaggctgcgaagcaagcgcgactggagaagtttgagatcccgactaagatc
aaactggtacctgagccatggaccccagagtctggccttgtcactgctgcactcaagctc
aagagggaggtgatcaggaagacgtatgagaacgaccttgctgaattttacgcctga
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