Oryza brachyantha (malo sina): 102715453
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Entry
102715453 CDS
T02995
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obr03009
]
102715453
Enzymes [BR:
obr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102715453
Ribosome biogenesis [BR:
obr03009
]
Eukaryotic type
90S particles
Helicases
102715453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DHX37_C
HA2_C
DEAD
HA2_N
AAA_22
ATPase
nSTAND3
AAA_19
Fuz_longin_3
PhoH
Motif
Other DBs
NCBI-GeneID:
102715453
NCBI-ProteinID:
XP_006647859
UniProt:
J3LGV7
LinkDB
All DBs
Position
2:23222945..23228907
Genome browser
AA seq
1272 aa
AA seq
DB search
MEDSNALILPCKRKNKAQGKAKDGKKIKEDPKMSKTKLKKLQKLEEEKQKKLLQAKSIEI
LRKHKISDDAYSLLHASGSIGQAETLKERRRRAVQFSKAGFDVPEELSLFKKDGDKIVPE
NSESSEEISPQKFVDSAKSEDTLRQCKNDINSDATNPVKCKLITDVGLSNQEPKTEVADD
VPNMLANQIIQSSIPSYSGKEIDVQDKEPGHEECIVQECFNPPIVVPVSRPHDVEKTRRD
LPIIMMEQEMMEAIYENSVVILCGETGCGKTTQVPQFLYEAGFGTSNRADRKGIIGITQP
RRVAVLATARRVSYELGLKLGKEVGFQVRHDKMVGSKCSIKFMTDGILLREVQSDFLLKR
YSVIILDEAHERSLNTDILIGMLSRIIKIRKSLYIEQQEKIHCGLSIDPEEKISQLKVVL
MSATLQLKDFISNRRLFDVIPPAIKVPVRQFPVTVHFSKSTHDDYLGQAYKKVMSIHKRL
PPGGILVFVTGQREVDYLCKKLQRASKQQTDKKTENVEGDGNGLSPEVDEREISEAYDID
IDESDHQDDMFCSYDEDESNAGPSVDSSDIEMEPEMDTDSEDDDSVSYETTEEDGPVLAF
LKGAEGSSVLKASFKAISRVSGEPESIDIPSDSAILEESIHAPFSKCTEPRPVSLGKLRV
LPLYAMLPASQQLRVFQDIPDGERLVVVATNVAETSLTIPGIKYVVDTGKQKVKNYNHAT
GMATYEIQWISKASASQRSGRAGRTGPGHCYRLYSAAAYGKDELFPEFSEPEIKKIPVDG
VVLMLKFMDINKVANFPFPTPPDKESLVEAERCLEVLEALDSKGTLTPMGRAMAQYPMSP
RHSRLLLTIIKILKSQQGFSRSNFILGYAAAAASALSFTNPFLMQNEFSGESKDNPESED
KDQQERKRQKKLKAMVREAHAKFSNPSSDALTISRALQLFELSESPVEFCRVNSLHLKTM
EEMSKLRKQLLRLIFHHSKSCEEFSWKLGGFEDVEEAWRYESDKKPMQLNEEELLGQGIC
AGWADRVAKRIRAFSGSSKDDRKVRAVHYQSCALNDTVYLHRSSYVAQIAPEFVVYSELV
HTKRSYMHGVTGVKPGWILKYASSLCTFSAPLEDPKPYYDPQKDQVYCYVSPIFSRHNWQ
LPLHSLPIKDDTSRLQVFACALLKGDVLPCLKVIQKFLALSPSVLLGPVSQRRVGDLLNR
MKIGSKLIDSRTALRDKWKVNPDFLYPEIKAWFQDKFHGQFGAIWEQMHQEVVLEGDELF
PKRYKKVKANQF
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagcaatgcgttgattttgccgtgcaagaggaagaacaaggctcaagggaaa
gccaaggatggtaagaaaatcaaggaagacccgaaaatgagtaagactaagctaaaaaag
ttgcagaaattggaggaggaaaagcaaaagaagctgctgcaagctaaaagcattgagatt
ttacggaagcacaagatttcagatgatgcatattctctgctgcatgcttcggggagtatt
ggacaagctgagactttgaaagaaagacgtaggcgtgccgtgcagttctccaaggctggt
ttcgatgtccctgaagaactctctctattcaagaaagacggcgataaaatagttcctgaa
aacagtgagtcctcagaggaaatttccccgcagaagtttgttgattcagcaaaaagtgag
gatactctcaggcagtgtaaaaatgacataaatagtgatgcaacgaatcctgtgaaatgc
aaactgattacggatgttggactgagcaatcaagaaccaaaaactgaagttgctgatgat
gttccgaacatgttggcaaatcagataattcaatcatctattccaagttattctggtaaa
gagatagatgtgcaggataaagagccaggacatgaagagtgtattgtacaagagtgcttc
aatcctccaattgttgtacctgtgtcaaggccacatgacgttgagaaaacaaggagggat
ctcccaataataatgatggagcaggaaatgatggaagctatctatgaaaattctgtggta
attttatgtggagaaacaggctgtggtaaaactactcaagttccacagttcttgtatgaa
gctggctttggcacaagtaatcgggctgacagaaaaggaataattggtatcactcaacca
cgacgtgtagctgtacttgccacagctaggagggtgtcctatgagctaggtcttaagcta
ggaaaggaggtcggttttcaggttaggcatgataaaatggtaggaagtaaatgctcgatc
aagtttatgacggacggcattttgcttcgagaggtccagagtgactttctgctgaagcgc
tattctgtaatcatcttggatgaggcgcatgaaaggagcttgaacacagatatacttatt
gggatgctatccagaattataaagatccgcaagtctttgtacatagagcaacaggaaaaa
atacattgtggtttgagcattgatccagaagaaaagattagtcagttgaaagtggtgcta
atgagtgctaccttgcaattgaaggactttatttcaaacagaagattgtttgatgtgatc
ccaccagctataaaggtacctgtacggcaattcccagtaacagttcacttctcaaagagt
acacatgacgattatttagggcaagcttataaaaaggttatgtccatccacaagagactt
ccaccaggtggaattcttgtgtttgttactgggcaacgagaagtcgattacttgtgtaag
aaattgcaaagagcatccaagcagcaaactgacaagaagactgaaaatgttgagggagat
gggaatggtttgagcccagaagtagacgagagggagatcagtgaagcatatgatattgat
atagatgagtctgatcaccaagatgacatgttttgctcatacgatgaagatgagagtaat
gctgggccaagtgtagattcttctgatattgaaatggaacctgagatggataccgacagt
gaggatgatgattctgtttcttatgagaccacagaagaggatgggccagtattagcattt
ttgaaaggtgctgagggttcatctgtattgaaggcatcatttaaggctatatcaagagtg
tcaggagaaccagaaagcatcgatataccaagtgattctgcaattttagaagagtcaatt
catgctccttttagtaaatgcacagaacctaggcctgtttcacttggtaaacttcgtgtg
ttaccactttatgcaatgttaccagcttcacagcagcttcgagtgtttcaggatattcct
gacggtgaaagattagttgttgttgcaacaaatgttgcagaaacctctttaacaattcct
ggcataaaatatgtagttgatactgggaaacaaaaagttaagaactacaaccatgctact
gggatggcaacttatgaaatccagtggataagcaaggcatctgcatcccagcgttctggg
agagctggaagaacagggcctgggcactgttatcgtctctactcggctgcagcatatggt
aaagatgaattatttcctgagttctctgagcctgagattaagaaaattccagtcgatggt
gttgtgcttatgctcaagtttatggatattaataaggtggcaaactttcctttccctaca
cctcctgacaaggaaagtttggttgaagctgagcgttgcttggaagtattggaagcgctt
gatagcaagggcacacttacaccaatggggagggctatggcacaataccccatgagccca
cgacattctcgccttcttctgaccataattaaaattttgaaaagtcagcaaggcttttcc
agatctaatttcatattgggatatgcagcagctgctgcatctgctttgagttttacaaat
ccttttctcatgcagaatgaatttagtggtgaatcaaaagataaccctgaatccgaagat
aaggatcaacaggaaaggaagagacagaagaagctcaaagcaatggttagagaggcccat
gcaaaattttccaatcctagcagtgatgctttaaccatttcccgtgccttgcagttgttt
gaattgtcagaaagcccagtggaattttgcagagtcaactcacttcatctcaaaacaatg
gaagaaatgtcaaaattgaggaagcaacttcttcgattaatatttcaccatagcaaatct
tgtgaagaattttcttggaaacttgggggttttgaagatgtagaagaggcctggaggtat
gagtctgataaaaaaccaatgcaattgaatgaagaggagcttctaggacaaggaatatgt
gctgggtgggctgatagggttgcaaagaggattcgtgccttttctggatcatctaaagat
gatagaaaggttcgggctgttcattatcagtcttgtgctctcaatgatacagtatatcta
caccgatcatcttatgttgcccaaatcgcaccagaatttgtagtttactcggaactagtt
catacaaagagatcatacatgcatggtgtaaccggtgtcaagccaggatggattttgaaa
tatgctagttctctttgtaccttctctgcaccattggaagatccaaaaccttattacgat
cctcaaaaggatcaagtctactgttacgttagccccatcttttctcgacataattggcag
cttccgttgcatagtctacctataaaagatgacaccagtcgattgcaggtatttgcatgt
gctttgcttaaaggagatgtcttgccatgtcttaaggtcattcagaagttcctggcactg
tcaccatctgttctcctgggacctgttagccaaagaagagttggggatcttcttaacagg
atgaagataggttcaaagttaatagatagccggacagcactaagagataagtggaaagtt
aatccagattttctttatcctgagatcaaagcgtggtttcaggataaatttcatggccag
tttggagcaatatgggaacaaatgcatcaagaagttgttcttgagggcgatgaacttttt
ccaaagaggtacaagaaagttaaagctaatcaattctag
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integrated database retrieval system
