KEGG   Oryza brachyantha (malo sina): 102715577
Entry
102715577         CDS       T02995                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03020  RNA polymerase
obr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102715577
  09124 Replication and repair
   03420 Nucleotide excision repair
    102715577
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obr03021]
    102715577
   03400 DNA repair and recombination proteins [BR:obr03400]
    102715577
Transcription machinery [BR:obr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     102715577
  RNA polymerase III system
   RNA polymerase III
     102715577
  RNA polymerase I system
   RNA polymerase I
     102715577
DNA repair and recombination proteins [BR:obr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102715577
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1
Other DBs
NCBI-GeneID: 102715577
NCBI-ProteinID: XP_040379712
LinkDB
Position
4:complement(13118081..13120992)
AA seq 205 aa
MASEEETSRLFRIRRTVMQMLQDRGYLVMDKDIDMSRPDFVGRYGDPVNRENLVIYCSRK
GDTADQIYVFFPKDPKPGVKTIRNYVDRMKQESVFNGILVVQQALSAFARSAVQEVSQKY
HLEVFQEAELLVNIKHHTLVPEHELLTPEQKKTLLERYTVKETQLPRIQITDPIARYYGM
KRGQVVKIIRNSETAGRYVTYRYVV
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcgtcggaggaggagacgagccggctgttccgcatccgccgcacggtgatgcagatg
ctgcaggaccgcggctacctcgtgatggacaaggacatcgacatgtccaggcccgacttc
gtcggccgctacggggaccccgtcaaccgcgagaacctcgtcatctattgcagcaggaag
ggcgacaccgccgaccagatctacgtcttcttccccaaggaccccaagcccggggtgaag
acgatcaggaactacgtggataggatgaaacaggagagcgtcttcaacggcatcctcgtc
gtgcagcaggcgctcagcgcgttcgcccgcagcgccgtgcaggaggtctcccagaagtac
cacctcgaggtcttccaggaagcggaactacttgtgaacattaagcaccatactctagtg
ccagagcacgagctcctgacgcctgagcagaagaagacgctgctggagcgatacaccgtg
aaagaaactcagctcccccggattcaaattactgatccaatagcaagatactatggcatg
aagcgtgggcaagttgtaaagatcatccgaaacagcgagaccgccggaagatatgtgacc
taccgctatgttgtgtga

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