Oryza brachyantha (malo sina): 102715667
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Entry
102715667 CDS
T02995
Name
(RefSeq) cyclic nucleotide-gated ion channel 4-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
102715667
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
obr04040
]
102715667
Ion channels [BR:
obr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102715667
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
102715667
NCBI-ProteinID:
XP_040380658
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Position
5:16467371..16471238
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AA seq
717 aa
AA seq
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MLVSSAARSTGSPSPAAMSGELSTRPSTSSSGASPSGHARRPEHGETTPTTATTRGGEVA
ASASDAKGRVLRRRRRRRRGLLGAASWARIDPRARWVREWNRAYLLACAAGLVVDPLFLY
AVSLSGPLMCVFLDGWLAAAVTALRLMVDAMHAWNIVTQLRVAPAGRKPAAAAAVDEEQP
EPEAAAAAPAPAADADATSKLRDRGRCRKGLVLDFFVILPVMQLVVWVAAPAMIRAGSTT
AVMTVLLVSFLFEYLPKIYHSVVFLRRMQNQSGHVFGTIWWGIALNLMAYFVAAHAVGAC
WYLLGVQRATKCLKEQCVRAGPPACASPTAVACASPLYYGGAVASVGGDRLAWGKNGQAR
STCLGGGDSYQYGAYKWTVMLVANPSRLEKMLLPIFWGLMTLSTFGNLESTTEWLEIVFN
IITITGGLILVTMLIGNIKVFLNATTSKKQAMHTRLRSLEWWMKRKEVPQGFRQRVRQFE
RQRWAATRGVDECRIVRDLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSL
IFPKGEIIVREGEPVQRMLFIVRGHLQCSQAMRNGAASCCTLGPGNFSGDELLSWCMRRP
FSERLPASSSTLATAESTEAFGLEAADVKYVTQHFRYTFTNDRVRWSARYYSPGWRTWAA
VAVQLAWRRYKHRKTLASLSFIRPRRPLSRCSSLGEEKLRLYTAILTSPKPNQDDDF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgtcctctgccgcgcgatcgacgggctcgccgtcgcccgccgccatgtcaggc
gagctctccacgcgcccgtcgacctcctcgtcaggcgcctccccctcgggccacgcgcgg
aggccggaacatggagagacgacgccgacgacggcgacgacgcgtggtggcgaggtggcc
gcgtcggcctccgacgccaagggccgggtactgcggcggcggcggcggcggcggcgaggg
ctgctcggcgccgcgtcgtgggcgaggattgacccgcgggcgaggtgggtgagggagtgg
aaccgcgcctacctgctggcctgcgcggcggggctcgtggtggacccgctgttcctgtac
gccgtgtcgctgagcggcccgctcatgtgcgtcttcctcgacggttggctcgccgccgcg
gtcaccgcgctccgcctcatggtggacgccatgcacgcctggaacatcgtgacgcagctc
cgcgtcgcgcccgccgggcggaagccggcggccgccgccgccgtggacgaggagcagcct
gagcctgaggccgcggcggcggcgccggcgccggcggcagacgcggacgccactagcaag
ctccgggaccgcgggaggtgcaggaaaggattggtgctcgacttcttcgtcatcctcccc
gtgatgcagttggtggtctgggtggcggcgccggcgatgatacgggcggggtcgacgacg
gcggtgatgacggtgctgctggtgtcgttcctgttcgagtacctgcccaagatctaccac
tccgtcgtcttcctccgccggatgcagaaccagtccggccacgtcttcggcaccatctgg
tggggcatcgccctcaacctcatggcctacttcgtcgccgctcatgcagtgggggcgtgc
tggtacttgctgggggtccagagggccaccaagtgcctgaaggagcagtgcgtgcgcgcc
gggccgccggcgtgcgcgtcgccgacggcggtggcctgcgccagcccgctctactacggc
ggcgccgtggcgtccgtcggcggcgacaggctcgcctggggcaagaacggtcaggccagg
agtacgtgcctcggcggcggcgacagctaccagtacggcgcgtacaagtggaccgtgatg
ctcgtcgccaaccccagccgcctcgagaagatgctcctccccatcttctggggcctcatg
acactcagcacgttcgggaatctggagagcacgacggagtggctggagatcgtgttcaac
atcatcacgatcacgggggggctgatcctggtgaccatgctgatcgggaacatcaaggtg
ttcctgaacgcgacgacgtcgaagaagcaggcgatgcacacgcggctgcggagcctggag
tggtggatgaagcggaaggaggtgccgcagggcttccggcagcgggtgcggcagttcgag
cggcagcggtgggcggcgacgcgcggcgtcgacgagtgccggatcgtccgcgacctcccc
gaggggctccgccgcgacatcaagtaccacctctgcctcgacctcgtccgccaggtcccg
ctcttccagcacatggacgacctcgtcctcgagaacatctgcgaccgcgtcaagtccctc
atcttccccaagggcgagatcatcgtgagagaaggggagccggtgcagaggatgctgttc
atcgtgagggggcacctgcagtgcagccaggcgatgaggaacggcgcggcgagctgctgc
acgctggggccgggcaacttcagcggcgacgagctgctgtcgtggtgcatgcggcggccg
ttctcggagcggctgccggcgtcgtcgtcgacgctggcgacggcggagagcacggaggcg
ttcgggctggaggccgccgacgtcaagtacgtgacgcagcacttccggtacacgttcacc
aacgacagggtgcggtggagcgcgcggtactactcccccgggtggcggacgtgggcggcc
gtcgccgtgcagctcgcgtggcggcgctacaagcaccgcaagacgctcgcgtcgctctcc
ttcatccgcccgcgccgcccgctctcgcggtgctcgtcactcggcgaggagaagctccgg
ctctacacggccatcctcacctcgcccaagcccaaccaggacgacgatttctag
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