Oryza brachyantha (malo sina): 102715683
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Entry
102715683 CDS
T02995
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC102715683
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102715683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obr03032
]
102715683
03400 DNA repair and recombination proteins [BR:
obr03400
]
102715683
DNA replication proteins [BR:
obr03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
102715683
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102715683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
102715683
NCBI-ProteinID:
XP_015694477
LinkDB
All DBs
Position
7:complement(19185645..19192532)
Genome browser
AA seq
1346 aa
AA seq
DB search
MLAYDSDDADGDLFAGVRFALVGFDTLSNSQYRSEMVRRGGVDAGAYGVGCTHLIVHGLV
YDNPICVAARKDGNKVVSELWVEHTLDLGELADADRVLYRPVRDLSGIPGSKSLCICLTG
YQKNKREDIMEMANLMGAQFSKSLTHKVTHLICYKFEGEKYKVAKQENINLVNHQWMEDC
LMAWEILPVHDYTKSGWELEILAAQANDSEDDEEEAGRSSSGNKHVTRSACTREIRMTTL
SDPDSQVPIRGPTISSRNAEIATGGHVSTPETIKNAGGSSKKLVNSKSDIQDILTSANPD
AHGSSHHPLDCKEEAPAAQVHRDEANDDVKSARSASTGAHCISNIGGSTVCSDHHVHQLT
TVPAMWVNGTETIDGNCLDSTNQNNVNSALWPTPSKETFSAKTLQSSDMSGNVGQQDGGS
TPDLNPAIDQSNVERKLTLHEANLRLKGNAASKNTPILSYNRRCCRKPVSLEANLRPTGS
PQNFERITISPSMKSDHKISDLIDAESLRDDEVVKVVDKSGSALAQRRTSVLSSISVKPS
VSSETGSANIPFPNMESASKPATVPDLSRNSTQSVILTEKEKSGPFKSNLLIYRRASLKL
ARPVEREKLSESSTKGKKLLRGNSLALHEAGSEKGCAVNSSAVSEVDKRNYCSSLPNVDT
EMSDASLVNKTDAVAPYTEFGNVVFHQNMKAVHKEIQDTAIFSECETIPQEETSKVKNAS
GKRFGNVSNKSANRSIRNKDEVVSFKSDGDKVVSCENIKMQSERNCASPNSVECTLSIPE
QIPYSRATNVATKNLLDASEMNTSLTLSKTQLAEKYMKKNPGCSSSNEHRKSSSEKVSQT
ADVEMPDAPIANSTGSMSSKSDFKEVIPPENARSCPKRHSSNTNMGGPETCSPSVVPKNR
ARKAVAKRKVSAVQQNSFGAEPCKNGSTFVSEFKFVYSKRASDCSRNGNQKTLGQNLQSS
NENGTKDADGSFSKEAIRDRSKILQNSQARSSKRQKTAELIDVCTDDKENLPANSNIISK
SKHGNDCVSSNCSIKAAGGGKDVLADHGVVEENNGGMLTMLEPRLFILSGHRLLRKEYKS
ILRLLKGRVCRDSHHWSFQATHFITPELRRTEKFFAAAAAGRWILKSDYLTACNETGKFL
EEEPFEWHGHGLNNGDTISMDAPRKWRQLRQHTGHGAFYGMQIIIYGECISPSLDTLKRA
VRAGDGTILATSPPYTRFLKPDVDFAVVSAGTPSADAWVQEFKKHNIPCISADYLVEYVC
KPDHSLNKHVLFNMHDLADKSHAKLLKGQHDDVLAAGTGEATDGGDAEPTCSARGSKDRE
RTTLICGSEENGTGMLHMDYCCNPPL
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcatatgacagcgacgatgccgacggcgacctcttcgccggagtccgcttcgcc
ctcgtcggcttcgacaccctctccaattcccagtatcggtcggagatggtgcggcgcggc
ggcgtcgatgccggggcctacggcgtaggctgcacccacctaatcgtccacggcctcgta
tacgataacccaatctgcgtggcggcgcggaaggacggcaacaaggtcgtatccgagctc
tgggtggaacataccttggatcttggagagttggccgatgcagaccgggtactatataga
ccagtgagagatttgagtggcataccgggcagtaaatcactatgcatttgcttgacaggg
taccaaaaaaataagcgtgaagacataatggaaatggctaatttaatgggtgcacaattt
tccaagtctttaacgcacaaagtcacccatctcatttgctacaaatttgaaggtgagaag
tataaagttgccaagcaggaaaatatcaatctggttaatcatcagtggatggaagactgc
ttaatggcatgggaaattcttccagttcatgattatacaaaaagtggttgggaattagag
atactggcagcacaagccaacgactccgaagatgatgaagaagaagctggtagaagctca
tctggtaataaacatgtaactagaagcgcatgcactagagagattagaatgacaactctt
tctgatcctgatagccaagtacccattcgaggtcctactatctcctctcgcaatgcagaa
attgctactggaggacacgtcagcactccagagacgatcaagaacgcaggaggttcaagc
aaaaagttggtcaacagtaaatcagacatacaggatattcttacctctgctaatcctgat
gctcatggatcttcccatcatcctcttgattgcaaggaagaggctcctgcagctcaggtc
cacagagatgaagctaacgatgatgttaaaagtgcacgtagtgctagtactggtgcccat
tgcatttccaacataggtgggagcacagtttgttctgatcatcatgtgcatcaattaact
acggtacctgctatgtgggtgaacggcacagagaccattgatggaaattgtttggatagc
accaatcagaacaatgtgaacagtgcactttggccaaccccttctaaagaaactttctca
gcaaaaacattacagtcatcagatatgagtggaaatgtaggccaacaggatggtggatct
acacctgatcttaatcctgcaattgatcagtcaaatgttgaacggaagctaacattgcat
gaggctaacttgagattaaaaggcaatgcagcatcaaagaataccccaatcttaagttac
aatagaagatgttgccggaagcctgtgtcactagaagctaatttacgaccaacaggatca
ccacaaaattttgagagaattaccatctctccatcaatgaaaagtgatcacaaaattagt
gaccttattgatgctgaaagcctgagagacgatgaagtagtaaaggtggtggataaatca
ggtagcgcacttgctcagaggaggacgagtgtgctttcttcaatcagtgtgaagccatca
gtaagctcagaaactggaagcgcaaatattcctttcccaaacatggaaagtgcctctaaa
ccagcaacagttcctgatctgagtagaaactccacccaatctgtgattttaactgagaag
gaaaagtctggcccatttaaaagcaacctgttgatctatcggagggcttctttgaagctt
gcaaggcctgttgaaagagaaaagctttctgaaagctctactaagggtaagaaattgctg
agaggaaattcactggcactccatgaggcagggtctgaaaaaggttgtgctgtaaactct
tctgccgtttctgaagttgataaaagaaattattgttcctctcttccaaatgtggacact
gagatgagtgatgcgtcactggttaacaaaactgatgctgtggctccttacacagaattt
ggtaatgtggtttttcatcaaaacatgaaagcggttcataaagagatccaagatactgca
atcttcagtgaatgtgaaacaattccccaggaagaaacttctaaagtgaagaatgccagt
ggcaagaggtttgggaatgtctcaaataaatcagctaatagatctataaggaacaaagat
gaggttgtatcttttaagtctgatggtgataaagtcgtttcttgtgaaaatattaagatg
caatcagaaaggaattgtgctagtccaaatagtgttgaatgtacattatccattcctgaa
caaatcccatatagtagagcaactaatgtggctaccaagaacttgctggatgcgtcagag
atgaacacatcactaacactttcgaagactcagttagcagagaaatatatgaagaaaaat
cctggctgttcaagttctaatgaacatcgaaagagttcatctgagaaggtatctcaaact
gctgatgtcgagatgcctgatgcgccaattgctaatagcactggttctatgtcttcaaag
tcagattttaaggaagtgattcctccagaaaatgcaagatcttgccctaagagacactct
agcaacacaaatatgggtggccctgaaacttgcagccccagtgttgtaccaaaaaacaga
gcacgaaaggcagttgcgaagaggaaagtatctgctgtccagcagaacagctttggtgct
gagccttgcaagaacggcagtacctttgtatctgaatttaaatttgtatattcgaagaga
gcttcagattgttccagaaatggtaaccagaaaacactgggtcagaatctccagagttct
aatgaaaatgggaccaaagatgctgatggatcattttcaaaagaagccatccgggataga
tcaaaaatattacaaaattcacaagcaagaagcagcaaaagacaaaaaactgcagaatta
attgatgtttgtactgatgacaaggagaatctaccagcgaatagtaatataatttccaaa
tcaaaacatggaaacgattgtgtcagttcgaactgttctattaaagctgcaggaggtggc
aaagatgtgcttgctgaccatggtgtggtagaagaaaataatggtggaatgctaactatg
ctggagcccagattatttattttgagtgggcatcgcctcctgagaaaagagtataagtcg
atacttagactcctgaagggaagagtttgtagggattcacatcattggtctttccaagca
acacattttatcacccctgagctccgcagaactgaaaaattctttgcggcagctgctgct
ggcaggtggatactaaaatctgattatttgactgcttgtaacgagactgggaagttctta
gaggaagaaccatttgagtggcatggtcatggccttaacaatggtgatacaataagtatg
gatgctcctcggaaatggcgtcaactaaggcagcatactggccatggcgctttctatggg
atgcagataattatatatggggagtgcatttctccatcactggatacactaaagcgcgcg
gtgagagctggcgatggcaccatcttggcaacctccccaccttacacccgattcttgaaa
cctgatgtcgacttcgctgttgtatctgctgggacgccaagcgcagatgcatgggtacag
gaatttaagaagcacaacatcccatgcatcagcgcagattatcttgtcgagtatgtctgc
aagccagaccactctctaaacaagcacgtcctcttcaacatgcatgatctggcagacaag
tcccatgcgaagctactcaagggccagcatgacgacgtgcttgctgccggcaccggagag
gcaaccgatggaggcgacgctgaaccaacttgttctgctcgtggatccaaagaccgggaa
aggaccacgctgatctgtggcagcgaggagaatgggaccgggatgctgcatatggattat
tgttgcaaccctcccctttga
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