Oryza brachyantha (malo sina): 102715779
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Entry
102715779 CDS
T02995
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102715779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obr03400
]
102715779
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
102715779
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
RAG1_imp_bd
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
102715779
NCBI-ProteinID:
XP_040382576
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Position
8:complement(6530119..6536822)
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AA seq
980 aa
AA seq
DB search
MDALIEQKQLLRNSRHRSARCLHIGRCVFLDGMYYRRQKKASSDANGNVLIPGVATCLNG
ISLPPSNRVHDWGYGDTGEWGSISARHVKLINFLSSLHQHTANSLISSEMAAANTDSPLE
QTKQKDSTAIIVLDSDNEDEDAEGCGQLTSINNNQLTASGSTSPYTTWIVSGAKDQVNGT
LHAYGDQSTQIVPYGQNAPLINQFPLQTSYQPSLLFEKVILQKKPEEQRIQDLLAASHAE
KIAETQVLPTLPTERKRRKSDPNPSTPVDGDAGTALGKRKRKNQPNQAAVDSTLDLQQND
VPSQSYRTEIEEEEPVKESDGLDDLWKDFSLAAECTKLDTHEDMSNENEVDDEKEMDDDC
NHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRSKDADEIDTGAVKF
SEDFIVSDIAIHPRHAKQMRPHQLEGFNFLVKNLVGDKPGGCILAHAPGSGKTFMLISFI
QSFLAKYPSARPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRTEQLEVLKSWE
AQMSILFLGYKQFSRIICGDAGGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLK
RVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGGRSLKG
VPDSAFTEIVENTLLNDDNFTRKANVIRSLRDLTKDVLHYYKGDILDELPGLVDFSVFLK
LTPKQKDIVHKIEAYEKFKRSAVGTALYIHPCLSEISEGAAADRAINLTDATVDGLIESI
NIRDGVKARFFMNILSLANSAGEKLLAFSQYILPMKFLERLLVKMLGWHVGKEIFMISGD
TNPEDRELAMEQFNNSPDAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRA
FRPGQQKKVFVYRLVAAGSPEEKFHETAFKKEVIPKLWFEWSEHCTTEDFKLNQVDIDDS
EDQLLEANAIRHDIKALYRR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggatgcattgattgagcagaaacaactcttgagaaactcacgccatagaagtgcaagg
tgtttgcacattgggaggtgtgtgtttctcgatggcatgtattaccgcaggcaaaagaag
gcttcttctgatgccaatggcaatgtgttaattcctggagttgcaacatgtctgaatggt
atttcgcttcctccttcaaatagggttcatgattggggatatggcgatactggagaatgg
ggaagtatttctgctcgccatgtcaaattgatcaattttctttcttcgctgcatcaacac
actgcaaattctttgataagcagcgaaatggcagctgctaacacagacagtcctttggag
caaacaaaacaaaaggacagcacagcaataatagttcttgattctgacaacgaggatgaa
gacgcagaaggatgtggacagctcacatctatcaacaataaccaactgacagcatctgga
tcaactagtccttacacaacatggattgtatctggagcaaaagaccaagtaaatggaacc
ttgcatgcttatggagaccaaagcactcaaattgttccatatggtcagaatgcaccttta
atcaatcagtttccgctgcaaaccagctatcaaccatctttgctatttgaaaaggttata
ttgcagaaaaaacctgaggagcaacgtattcaagatctgctggctgctagccatgcagag
aagatagcagaaacacaagttctccctactcttcctactgagagaaaacgaaggaaatca
gatcccaatcccagcacccctgtagatggagatgcgggaactgccctaggaaaaagaaaa
agaaaaaaccagccaaatcaagcagcagttgattccaccttggatttgcagcaaaatgat
gttccgtcacaaagctacaggactgaaatagaagaggaggaacctgtaaaagaaagtgat
gggctcgacgatctttggaaagatttttcattggcagctgaatgtacaaagcttgacaca
catgaagacatgtccaatgaaaatgaagtggatgatgaaaaagagatggatgacgactgc
aatcatgacattcggattcatgaagatctaggccatgtatgccgtatctgtggcatgatt
gttagaaaggctgaaacgataattgattatcagtggaaaaaggcctcaaggacaagaaca
aattactatgaatcacgttcaaaggatgctgatgagattgatactggtgctgttaaattt
tctgaagatttcattgtctctgatattgccattcatccaagacatgcgaagcaaatgaga
ccacatcagttggaaggattcaacttcctggtcaagaatctagttggtgataagcctggt
ggttgcattctagcccatgcccctggttcagggaagacatttatgctcataagtttcatt
caaagttttttagcaaagtatccttctgcaaggccccttgttgtgctccctaaagggatt
ttaggtacttggaagagggagtttcagcggtggcaagtggaggacataccactgtatgat
ttctattctgttaaggctgacaaaagaacagagcaactggaagtcctcaaatcgtgggaa
gcccagatgagcatactgtttctcggatacaagcagttttcacgaatcatctgcggtgat
gcaggtggaaacattgcagctgcatgccgagacaggctgcttatggtccccaacctactt
atactggatgaaggtcatacaccaagaaatcgggagactgatgtactggcatcactaaaa
agagtccaaacaccacgcaaagtggtcttgtcaggcacacttttccagaatcatgtttct
gaagtgtttaacatcttggacctcgtgcgtcctaagtttctcaagatggaatcatcccgt
cctattgctagacgtataatgagtcaggttgcaatatcaggtggcaggagtttaaaaggg
gttcctgacagtgcattcactgagatagtagaaaacaccctgctgaatgacgacaacttc
actagaaaagccaatgttattagaagtcttagagatttaacaaaagatgtgcttcactat
tataagggtgatatcttagatgaactacctggcctagtggatttcagtgtgttcttgaaa
ctcactcccaagcagaaagacattgttcacaagatagaagcctatgaaaagttcaaaaga
agtgcagtggggactgcattgtacattcatccttgtctgtcagaaatttcagagggtgct
gctgcagatagggcgatcaacttgacagatgcaactgttgatggcttgattgagtctatc
aacataagagatggggtgaaggccagatttttcatgaatattctgtctcttgctaattct
gcaggagagaagttgcttgccttcagtcaatatatacttccgatgaaatttttggaaaga
ttgctggttaagatgttgggatggcatgtggggaaggagattttcatgatatctggtgat
actaatccagaagacagagaattagcgatggaacagtttaacaactcccccgatgcaaaa
gttttgtttggttctatcaaggcctgtggtgagggcatctcccttgttggtgcatcaagg
gtcatcattctagatgttcacttgaacccatctgttacccgtcaagcaattggacgtgca
ttcaggcctggacagcagaagaaagtgtttgtttacaggcttgttgccgctggttctcca
gaggaaaagttccatgaaactgctttcaagaaagaagttataccaaagctatggttcgaa
tggagtgagcattgcactactgaagacttcaaactgaatcaagttgatattgatgattct
gaagatcaattactggaggctaatgcaattcgccatgatatcaaggctctgtatagaagg
tga
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