Oryza brachyantha (malo sina): 102715823
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Entry
102715823 CDS
T02995
Name
(RefSeq) uncharacterized protein LOC102715823
KO
K14315
nucleoporin NDC1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102715823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102715823
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102715823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
17kDa_Anti_2
Lambda_tail_I
Motif
Other DBs
NCBI-GeneID:
102715823
NCBI-ProteinID:
XP_006647695
LinkDB
All DBs
Position
2:21064680..21069162
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AA seq
505 aa
AA seq
DB search
MDRAPPRGAPRDAVGQRWLAAFVFQAALSAAASALYLAASPRRRGRHSRLGVPPGLLLAL
HPFLSCAATGLLALAFLVSASPHPRPPPVPRRALAGSLLAAAGALCVGAAASLVPEESGW
AAVAGLGFRGAVLGAVFAAHYFVRRRWLLQFPVVQRPPFYGLKMGLLPSGKRALKVSLQA
FFLSFILIFVLPQQFRIKGSIGSQISTQIGIFIMGIAVSFCWELSHHFVQVVHTRRCSFA
PPQSTAAAETNPTEYILEALELSDPRSLMQYLAYQDLCAVSECNLEPWRRGAFFEESGET
YKRIVTACLKPLEEFTSKIAEALEGFSSEKPELLSQQFKLASAFNDSQICTWCARTLASL
TARSRQEDRYGVAQLTGCNAAVMSTLLSALVAVEACLGKKTNPQPTHSLGPASIKWANFS
TGRKGNVTAIASTQRGGLHTKAYSMADVLRTSIYQMVSAFEDDMRANAKASSLEKNWIGE
GRKPVFGSHAVLVQKLSLFIEYRAV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggacagggcaccgccgcgcggcgccccccgcgacgccgtcggccagcggtggctcgcc
gccttcgtcttccaggccgcgctctcggccgcggcctccgcgctctacctcgccgcctcc
ccgcgccgccgcggccgccactcccgcctcggcgtgccccccggcctcctcctggcgctc
cacccgttcctctcgtgcgccgccacggggctcctcgcgctcgccttcctcgtctccgcg
tccccgcacccgcgacctccaccggtgccgcgccgcgccctcgcggggtccctcctcgcc
gccgccggcgcgctctgcgtgggggccgccgcgtcgctggtccccgaggaatctgggtgg
gcggctgtcgctgggctagggttccgcggtgctgtattgggagcggtgttcgccgcgcac
tactttgtgcgtcggaggtggttgctgcagttccccgttgtgcagcgacctccgttctat
ggtttgaaaatggggcttctgccatctggaaaaagggctctgaaggtgtcacttcaggcc
tttttcctttcctttatcctgattttcgttctgcctcagcaattcagaatcaagggatcc
attggaagccaaattagtacccagattggtatttttataatgggtattgctgtttccttc
tgttgggaattaagtcatcattttgtgcaggttgtgcatacaagaaggtgcagtttcgct
ccaccgcagagcactgctgctgcagagactaatcctactgagtatatcctagaagcattg
gaactgagtgatccaagatcattaatgcagtatcttgcataccaagatttatgtgctgta
tctgagtgtaacttagaaccatggcgtcgaggggccttctttgaggaatctggtgagaca
tacaaaagaattgtgacagcctgtttgaagccgcttgaggagttcacatcaaaaattgct
gaagctcttgaaggtttttctagtgaaaaaccagagttgttgtcacaacaattcaaacta
gccagtgcatttaatgattcacagatatgcacctggtgtgctcggacattggcatcttta
actgcacgctcacgccaagaagatcggtatggagttgctcaactcacaggctgcaatgcc
gctgtgatgtctactttgctgtctgcgctagttgcagttgaggcatgtttggggaagaaa
actaatccacaacctacgcactcactgggtccagcaagtattaagtgggctaacttttcc
accgggagaaaaggcaatgtaactgccattgcaagcacgcaaagaggtggtcttcacact
aaagcttattccatggctgatgtgcttagaacttccatctatcagatggtttcagccttt
gaggatgacatgcgggcaaatgcaaaagcatcaagtttggagaagaattggattggtgaa
ggaagaaaacctgtatttggttcacatgctgtgttggttcagaagttaagcctgttcatt
gaataccgtgctgtctga
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