Oryza brachyantha (malo sina): 102716151
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Entry
102716151 CDS
T02995
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00040
Pentose and glucuronate interconversions
obr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102716151
Enzymes [BR:
obr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102716151
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
102716151
NCBI-ProteinID:
XP_006659283
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Position
8:6423166..6424427
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AA seq
389 aa
AA seq
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MASRRSNAPLLLPLAVLFLLGSGGVSAANINGANVIDRCWRGQRSWAADRQRLAVCSVGF
TGKMRQNRGAGVAAYTVTDPSDDPVRPRPGTLRYGATVLPGKVWITFARDMHIRLAQPLF
VKSFTAIDGRGADVHVAGGAGIVLYHVNDVIIHGLHVHDCRAQPPGRVVVPGGAVQASGS
GDGDAIRLVASSKVWIDHNTLSRCEDGLLDVTVGSTDVTVSNNWFHDHDKVMLLGHDDGF
STDRRMRVTVAFNRFGPNVNQRMPRIRHGYAHVVNNLYDGWRDYAIGGSMGPSVKSQGNL
FAASGGAGDNKKVTRRMPAVARDAGGKGDQWHWHSVGDAFENGAFFRQVGNRVRPNYNRH
QAFPVASAGDVRALTSGVGALRCSAMAAC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaggagatccaatgcgccactgcttctgcctctggccgtcctctttctcctc
ggcagcggcggtgtctctgccgcgaacatcaacggcgcgaacgtcatcgaccggtgctgg
cgcggccagcgcagctgggccgccgaccggcagcggctggccgtgtgctcggtagggttc
accggcaagatgaggcagaaccgcggcgccggcgtggccgcgtacacggtcaccgacccg
agcgacgaccccgtccggccgcgccccggcacgctccggtacggcgcgacggtgctgccg
gggaaggtgtggatcaccttcgcgcgcgacatgcacatcaggctggcgcagccgctgttc
gtgaagagcttcaccgccatcgacggccgcggcgccgacgtgcacgtcgccggcggggcc
ggcatcgtgctgtaccacgtgaacgacgtcatcatccacgggctccacgtgcacgactgc
cgcgcgcagcctcccgggcgggtggtcgtccccggcggagccgtgcaggcctccggcagc
ggcgacggcgacgccatccggctggtggcgagctccaaggtgtggatcgaccacaacacg
ctgtcccggtgcgaggacggcctcctcgacgtgacggtcggctccaccgacgtcaccgtc
tccaacaactggttccacgaccacgacaaggtgatgctcctcggccacgacgacggcttc
tccaccgaccgccgcatgcgcgtcaccgtcgccttcaaccgcttcggcccaaacgtcaac
cagcgcatgccaaggataaggcacgggtacgcgcacgtggtgaacaacctgtacgacggg
tggagggactacgccatcggggggagcatggggccgagcgtgaagagccagggcaacctg
ttcgcggcgtcgggtggcgccggcgacaacaagaaggtgacgaggaggatgccggccgtg
gcgcgcgacgccggcggcaagggtgatcagtggcactggcactccgtcggcgacgcgttc
gagaacggcgccttcttccggcaggtgggcaacagggtgcgccccaactacaaccggcac
caggcgttcccggtggcgagcgccggcgacgtcagagcgctcaccagcggcgtcggcgct
ctcaggtgctctgccatggcggcgtgctag
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