Oryza brachyantha (malo sina): 102716189
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Entry
102716189 CDS
T02995
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102716189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102716189
03036 Chromosome and associated proteins [BR:
obr03036
]
102716189
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102716189
Coactivators
SAGA/TFTC/STAGA complex
102716189
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102716189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
102716189
NCBI-ProteinID:
XP_006647621
LinkDB
All DBs
Position
2:complement(19716359..19724175)
Genome browser
AA seq
784 aa
AA seq
DB search
MVGQLQASEQEGNAQANQQLVQQHVNLAGQLSQPNLVTEGLANEIPTQLAEPNHQPEQEA
PHSENHQIQAETNSFQLAEKETGYAGLPNYAGPKADVAQTSGDQQEVKQMVGQQAPPGAQ
DARKRGYQPSIPFNMLIPILQAHLDRDKDMQLQTVWAKLRRNEVHKDDFLRVIRNIVGDQ
MLKQAAHKVFAQMQAQAQRSGQANVNQQANVNQQANANQYSLPSQVSSSGSAQLHDQQVH
MSTTPNQGQKSQALSSSQAFVPSGPQVQSSMTALDNSIQRPDVKGMHAMPNRPPAMNSAI
SAQMINKQQQPTQVQQASQQIYGTTNRADQPSTRPTSGSTPLTSLSSESEIRPSLHPHGM
VPAKIGTVPTHPMTQHNAAAQQMQQNKDSKSNASNPRSNAKDSGSAGKARQVGVGGSSAK
SQGKQAPPNVSASPAARTNKKSAGQKKSLDTAGSTPPPPSKKQKTSGTFQEQSIDQLNDV
TAVSGVNLREEEEQLLSAPKEESWASEEARRIAQEEDEKLFLQKGPLLKKLAEIIPKCNL
KNMGNDVEHCLSMCVEERLQRFISTLIRVSKQRIDTEKTGHRLVITSDVGRQIFRMNQKA
KEEWDKKQAEETDKNKKQNEVDGSGTAELDKEKEETRPKNAKPNKEEDDKMRTTAANVAA
RQAVGGSDMLSKWQLMAEQARQKREGIDPASASQRGTASRPLHMAGKGPADHREASKRTH
PAAFGTGSMNRQGRGPFAASQPKGPQRTISMKDVICVLEREPQMTKSRLIYRLYERRPGD
TTRD
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggtaggtcagctgcaagcatctgagcaggaaggaaatgcccaagcaaaccaacaattg
gtgcaacaacatgtgaatttagctggacagttgtctcaaccaaacttggtaactgaaggt
ttggcaaatgaaatacctacccaattagcggaacccaatcaccagccagaacaagaagcg
ccccattctgaaaaccatcaaatacaggcagagacaaacagcttccagttggctgaaaaa
gaaacaggctatgctggtctaccaaattatgcaggccccaaggcggatgtggctcagact
tcaggagatcaacaagaagtaaagcaaatggttggtcagcaagcgccacctggtgcccag
gatgcaaggaagcggggatatcaaccttctataccatttaatatgttgattccaatcctg
caggctcatcttgacagagacaaggatatgcagcttcaaactgtgtgggcaaaacttagg
cgtaatgaagttcataaagatgatttcttgagagtcatcaggaacatcgttggagatcaa
atgctcaagcaggcagcccataaagtttttgcacagatgcaagcccaggcacaaagaagt
ggccaggcaaatgtaaatcagcaggctaatgtaaatcagcaggctaatgcaaatcagtac
tctttaccatcacaagtatcgtccagcggttcagctcaattacatgatcaacaagttcac
atgtccaccacacctaaccagggccagaaaagccaagcattatcttcatctcaagccttt
gtgccatctggccctcaggtacaaagcagtatgactgctcttgataattctatccaacgg
ccagatgtgaaggggatgcatgctatgccaaaccgaccacctgctatgaactcagcaatt
tctgcacaaatgattaacaaacagcagcaacccacacaagtacagcaagcctcacagcaa
atatatgggacaactaaccgcgctgaccagccatccactaggccaaccagtggttctaca
cctcttacatcactgagttcagaatcagaaataaggccttctttgcatcctcatggaatg
gttcctgcaaaaattgggacagttcctactcatccgatgacacaacacaatgcagctgcg
cagcaaatgcaacaaaacaaagattcgaaaagtaatgcttctaatccaagaagtaatgca
aaagattcggggtctgcaggtaaggctcgccaagttggcgttggaggttcttcagcaaaa
tcacaaggaaagcaggccccccctaacgtgtccgcatcacctgctgcaaggactaacaag
aaatccgccgggcagaaaaagtcattagacacagcaggatctacaccgccacctcctagc
aaaaagcagaagacttctggaaccttccaggaacaaagcattgaccaacttaatgatgtc
actgctgttagtggtgttaatcttagggaagaagaagaacagctactctctgccccaaag
gaagagagctgggcctcggaagaagcacgaagaattgcacaggaagaagatgagaaactt
tttctgcaaaaaggcccacttctgaagaagctagcagaaatcattcctaaatgcaatttg
aagaacatgggcaatgatgttgagcattgtttatcaatgtgcgtggaggagcgactgcaa
agatttatcagtactcttataagagtttcgaagcagagaattgacacagaaaagactggc
catcgactagttataacgtcagatgttggaaggcaaattttccgaatgaaccagaaagct
aaagaagaatgggataaaaaacaagcagaagaaacagacaagaacaagaaacaaaatgag
gttgatggcagtggtactgcagaattagacaaagaaaaagaggaaactcgtccaaagaat
gcaaagcccaacaaagaagaagatgacaagatgagaacaacagctgctaatgttgctgcc
cgacaggcagttggaggaagtgatatgctgtccaaatggcaactgatggctgaacaagct
agacagaaacgcgaaggcattgatccagcttctgcttcacagcgcgggacagcttccagg
ccattgcatatggctggaaaaggtcccgcagaccaccgcgaagcttcaaagaggacccat
cccgcagcgtttggaactggaagcatgaacaggcaaggtaggggtccattcgcagcgtct
caaccaaaaggaccacagcgaaccatttctatgaaagatgtaatatgtgtccttgagagg
gagcctcagatgacgaagtcgaggctgatatatcggctctatgagcggcgacctggagat
accaccagagattag
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