Oryza brachyantha (malo sina): 102716202
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Entry
102716202 CDS
T02995
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102716202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102716202
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
102716202
Prokaryotic type
Archaeal type
TFB
102716202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
TRAFD1-XIAF1_ZnF
Motif
Other DBs
NCBI-GeneID:
102716202
NCBI-ProteinID:
XP_006651133
UniProt:
J3LL01
LinkDB
All DBs
Position
3:complement(4329317..4332460)
Genome browser
AA seq
528 aa
AA seq
DB search
MSQPSQCPYCRASAPARCVTTQPPLSRAVSECSSCARLVLERHLHTHPFFPLLPSLHALP
LVTPDLADAAPSPSPSPASAGGGDDDDDDPFLPAGFVSAFSAFSLERHPVLARSASAFSG
QLAELERALTVESAASSTPDPAGPMVSVDSLRAYLQIVDVASILRLDREIADHAFDLFKE
CSSATCLRNRSVEALATAALVQAIREAQEPRTLQEISTASNLPQKEIGKYIKILGESLKL
SQPLNSNSIAVHMPRFCSLLQLNKSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLAC
QLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPPNYTPATPPEKAFPMTTIYSS
RSSSGKDLYQDKQLDSAKLKSSEAAEPDHMVIVKEEEDKKIGPFSGRSSAKAETHDLNQA
FWQPNAPFSSSTKLDHDKTEANVRGINLNEASCTMDSDRADMPVKSPFAERWLNESKAIP
SPSRQPAPWQLKQAAPPTGSSYLSMPHGLELLSRGKRSAGEGGDKEGR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagccgtcgcagtgcccctactgccgcgcctccgccccggcgcgctgcgtcacc
acacagccgccgctctcccgcgccgtctccgagtgctcctcctgcgcccgcctcgtcctc
gagcgccacctccacacccaccccttcttccccctcctcccctcgctccacgcgctccct
ctcgtcacccccgacctcgccgacgccgcgccgtcgccgtccccctcgcccgcatccgcc
ggcggtggggacgacgacgacgacgaccccttcctcccggccggcttcgtctccgccttc
tcggccttctccctcgagcgccatcccgtcctcgcccgctccgcgtccgccttctccggc
caactcgccgagcttgagcgcgcgctcaccgtcgaatccgccgcctcctccactccggac
cccgcggggccgatggtgtccgtcgacagcctccgcgcctacctccagatcgtggacgtc
gcgtccatcctgaggctggaccgggagatagcggatcacgccttcgacctcttcaaggag
tgctcctccgctacgtgcctcaggaaccgcagcgtcgaggcgcttgccacggccgcactt
gtgcaggccatccgcgaggcgcaggagcccaggaccttgcaggaaatctctactgctagc
aatcttcctcagaaagaaataggaaaatacatcaaaatacttggtgaatcattgaaactg
agtcaacctcttaacagcaactcaatagcggttcatatgcctcggttttgcagcctactc
cagctcaataaatctgctcaggaacttgcagcccatattggtgaggttgttgttaataaa
tgcttttgcacaaggaggaaccccataagcatatctgctgctgccatctatcttgcatgt
cagcttgaagacaagcgtaaaactcaggcagagatctgtaaggtaacaggccttacagag
gttactctgcgcaaagtttataaagaactcttggagaattgggatgatttgctccctcct
aactatacaccagctacaccaccagagaaagctttcccgatgaccaccatttattcatca
cgctcatcgtctggtaaagatctttatcaagacaaacagttggacagtgctaagctaaag
agctcagaagctgcagagcctgatcacatggtcattgtaaaagaggaggaagacaagaaa
attggtccatttagtggtcgatcaagtgcaaaagctgagacccatgacttgaatcaagca
ttttggcaaccaaatgctccgttctcctcatcaacaaagttggatcatgacaagacggaa
gcaaatgtccgtgggattaaccttaacgaggcgtcatgcacaatggattctgacagggca
gacatgcctgtgaagtcaccctttgctgagaggtggctaaatgaatcaaaggcgattcca
tcgcccagtaggcagcctgctccatggcagcttaagcaagcagcgccgccgactgggtcc
tcgtatctcagtatgccccacggcctggagcttctctctcgtgggaaaagaagtgctggc
gaaggtggtgacaaggagggaaggtga
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