Oryza brachyantha (malo sina): 102716345
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Entry
102716345 CDS
T02995
Name
(RefSeq) homeobox-leucine zipper protein ROC6
KO
K09338
homeobox-leucine zipper protein
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obr03000
]
102716345
Transcription factors [BR:
obr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
102716345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
102716345
NCBI-ProteinID:
XP_015696802
LinkDB
All DBs
Position
9:complement(13529706..13536629)
Genome browser
AA seq
871 aa
AA seq
DB search
MSFGGMFDGAGSGVFSYDAGGGGGGGGGGGVHNSRLLPAPPVPKPGGGYAAPGLSLGLQT
NMDGGHLGDMNRSLAMMGNGGSGSGGDGDSLGRGREDENDSRSGSDNLDGASGDDLDPDN
SNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQ
MKTQIERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAAVLGEVSLEEQHLRIENA
RLKDELDRVCALAGKFLGRPISSISSPSPPSLQACSGLELGVGSNGFGLGALGASGLQSI
PDLMGGSAGLPVGSAAMRLPAGIGGLDGAMHAAAADGGAIDRAVLLELALAAMDELVKVA
QMDEPLWLPSLDGGFEALNYDEYHRAFARVLGQSPGSYVSEATRESGIAIISSVDLVDSL
MDAPRWSEMFPCIVARASTTDIISSGMGGTRSGSIQLMHAELQVLSPLVPIREVVFLRFC
KQHAEGLWAVVDVSVDAVLRPDQNGGGGGGVSSSSSYMGCRLLPTGCIVQDMNNGYSKVT
WVVHAAYDETAVHQLYRPLLRSGQALGARRWLASLQRQCQYLAILCSNSLPARDHAAITP
VGRRSMLKLAQRMTDNFCAGVCASAAQKWRRLDEWRGGEGGGGAGDGEDKVRMMARHSVG
APGEPPGVVLSATTSVRLPGTLPQRVFDYLRDEQRRGDWDILANGEAMQEMDHIAKGQHH
GNAVSLLRPNATSGNQNNMLILQETCTDSSGSLVVYAPVDVQSMHVVMNGGDSAYVSLLP
SGFAILPDGHNSASPSPVDVGSASPSSTAGAGATGGGSNNTGSLVTVAFQILVNNLPTAK
LTVESVDTVSNLLSCTIQKIKSALQANIISP
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcggtggcatgttcgatggcgccggctccggcgtcttctcctacgacgccggc
ggcggcggaggaggaggaggaggaggaggagttcacaactctcgcctcctccccgcgccg
cctgtccccaaacccggcggtggctacgccgctcccggcctctctctcggcctgcaaacc
aacatggacggcggccacctcggcgacatgaaccggtccctcgccatgatgggtaacggc
ggcagcggcagcggcggcgacggtgactcgctgggccgcggccgggaggacgagaacgac
agccgctccggcagcgacaacttggacggcgcctccggcgacgacctcgacccggacaac
agcaacccacgcaagaagaagaagcgttatcaccgccacaccccgcagcaaatccaagaa
ctcgaagctgtgttcaaggagtgcccccaccccgacgagaagcaaaggatggagctcagc
cggcggctcaacctcgagagccggcaggtcaagttctggttccagaatcgccgcacccag
atgaagacgcagatcgagcggcacgagaacgcgctgctgcggcaggagaacgacaagctg
agggcggagaacatgacgatccgcgaggcgatgcggaaccccatgtgcgccagctgcggc
ggcgcggcggtgctcggcgaggtgtcgctggaggagcagcacctgcgcatcgagaacgca
cggctgaaggacgagctcgaccgcgtctgcgcgctcgcaggcaagttcctcggccggcca
atctcgagcatctcctcgcccagtccgccgtcgctgcaggcgtgctccggcctcgagctc
ggcgtcggaagcaatgggttcgggctcggcgccctcggggcctcggggttgcagtccatc
cccgacctgatgggtggctccgccggcctgcccgtgggctctgctgccatgcgcctcccc
gcgggcattggcggcctcgacggcgccatgcacgccgcggcggccgacggcggcgccatc
gaccgcgccgtgctcctcgagctcgccctcgcggccatggacgagctcgtcaaggttgcg
cagatggacgagccgctctggctccccagcctcgacggcgggttcgaggcgctaaactac
gacgagtaccaccgcgcgttcgccagggtgctcggccagagccccggcagctacgtctcc
gaggccacccgcgagtccggcatcgccatcatcagcagcgtcgacctcgtcgacagcctc
atggacgcgcctcgctggtcggagatgttcccgtgcatcgtggcgagggcgagcacgacg
gacatcatctccagcggcatgggcggcacgcgcagcgggtcaattcaactgatgcacgcg
gagctgcaggtgctgtcgccgctggtgccgatccgggaggtggtcttcctccgtttctgc
aagcagcacgccgagggcctctgggccgtcgtcgacgtgtcggtcgacgccgtcctccgc
cccgaccagaacggcggcggcggcggcggcgtttcctcctcgtcgtcgtacatgggctgc
cgcctcctccccaccggctgcatcgtgcaggacatgaacaatggctactccaaggtcacg
tgggtggttcacgcggcgtacgacgagacggcggtgcaccagctctaccggccgctgctc
cgctccggccaggccctcggcgcccgccgctggctcgcctcgctccagcgccagtgccag
tacctggccatcctctgttccaactccctccccgcccgcgaccacgccgcgataacgccg
gtggggaggaggagcatgctgaagttggcgcagcggatgacggacaacttctgcgccggg
gtgtgcgcgtcggcggcgcagaagtggcggcgcctggacgagtggcgcggcggcgagggg
ggcggcggcgccggcgacggggaggacaaggtgcgcatgatggcgcggcacagcgtgggc
gcgcccggggagccccccggcgtcgtgctgagcgccaccacgtcggtgcgcctccccggc
acgctcccgcagcgcgtgttcgactacctccgcgacgagcagcggcgcggcgactgggac
atcctggccaacggcgaggccatgcaggagatggaccacatcgccaagggccagcatcac
ggcaatgccgtctccctcctccgtccaaatgctacgagcgggaaccagaacaacatgctg
atcctccaggagacgtgcaccgattcatcgggctccctcgtcgtctacgcaccggtggac
gtgcaatccatgcacgtcgtcatgaacggcggcgactccgcctacgtctccctcctgccg
tccggcttcgccatcctcccggacggccacaacagcgcctcgccgtccccggtcgatgtc
ggcagcgcctcgccgagctccaccgcgggcgccggagccaccggcggcggcagcaacaac
accggctcgctggtgacggtggcgttccagatcctcgtcaacaatctgcccaccgcgaag
ctcaccgtcgagtcggtcgacaccgtcagcaacctcctctcttgcaccatccagaagatc
aagtccgctctgcaggccaacatcatctcgccatag
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