KEGG   Oryza brachyantha (malo sina): 102716461
Entry
102716461         CDS       T02995                                 
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr04142  Lysosome
obr04144  Endocytosis
obr05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:obr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102716461
   04142 Lysosome
    102716461
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    102716461
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:obr04131]
    102716461
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:obr04147]
    102716461
Membrane trafficking [BR:obr04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    102716461
Exosome [BR:obr04147]
 Exosomal proteins
  Proteins found in most exosomes
   102716461
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B
Other DBs
NCBI-GeneID: 102716461
NCBI-ProteinID: XP_040385584
LinkDB
Position
12:206263..216573
AA seq 1708 aa
MAAANAPIAMREALTLSSLGIAPQFVTFTHVTMESDKYICVRETSPQNSVVIIDMAMPNQ
PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPTKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGA
PERPQLVKGNMQLFSVEQQRSQALEAHAASFATFKVVGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQISQKYGLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAESSTTGGFYAINRRGQVLHATVNDATIVPFVSSQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIFIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRVAQLCEKAGLYLRALQHYTELPDIKRVMVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIVVQAAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGAYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWDKVLQPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEVAVEAQLFE
EAFAIFRKFNLNVQAVNVLLDNIRSIERAEEFAFRVEEDAVWTQVAKAQLREGLVSEAIE
SFIRADDATHFLDVIRAAEEANVYDDLVKYLLMVRQKAREPKVDGELIFAYAKTDRLSDI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDL
HDSFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD
RELSEDLLVYFIEQGKKECFASCLFICYDLIRADVALELAWMNNMVDFAFPYLLQFIREY
TNKVDELVKDRIESQNEVKAKEKEEKELVAQQNMYAQLLPLALPAPPGMGVPPPPMGGMG
MPPMGGMGMPPMGPGPMPAYGMPPMGSY
NT seq 5127 nt   +upstreamnt  +downstreamnt
atggcggcggccaacgcccccatcgccatgcgcgaggccctcacgctgagcagcctgggg
atcgcgccccagttcgtcaccttcacccacgtcaccatggagtccgacaagtacatctgc
gtccgcgagacctcgccgcagaacagcgtcgtcatcatcgacatggccatgcccaaccag
cccctccgcaggcccatcaccgccgactccgccctcatgaaccccaacacccgcatcctc
gccctcaaagctcaaatacctggaacaacacaggaccacctgcaaatcttcaatattgag
gctaaaacaaaaattaagtcccaccagatgcctgagcaggttgtgttttggaaatggatc
accccaaagttgctgggtttggtaacacaaacatcagtctatcattggtcaattgaggga
gattctgaaccaaccaagatgttcgataggacagctaatttggccaacaatcagattatc
aactatcgatgtgacccatctgagaagtggcttgtgcttattggaatcgcacctggtgct
ccagagaggccacaactggtgaaaggaaatatgcaacttttttccgtggagcagcagcgc
agtcaagcgcttgaagcccatgcagcatcctttgcaacatttaaggttgtgggcaatgag
aatccttcaactctcatctgctttgcctcaaagacaactaatgctgggcaaatcacttct
aagttgcatgttattgaattgggtgcccaaccagggaaaccagggttttccaagaagcaa
gccgatctctttttccccccagattttcaggatgattttcctgtagccatgcagatatct
cagaagtatggccttatctatgtaattacaaagcttggccttttgtttgtatatgacttg
gaaacagctgcagcagtctatagaaatagaattagcccagatcctatattcttgacagca
gagtcttctacaactggtggcttttatgccatcaataggagaggacaggttttacatgcc
acagttaatgatgcaaccatcgtgccttttgtcagcagtcaattaaataaccttgagtta
gctgtaaatctagccaaaagagctaatcttcctggggcagagaacctagttgtgcaaagg
tttcaggaactgtttgcgcaaacgaaatacaaggaagcagctgagttggctgcagaatct
ccccaaggtcttcttcgaactcctgagactgttgcaaaatttcagagtgttcctgttcaa
gctgggcaaacacctccactcttgcagtactttggcacattgctaactcgggggaagctc
aatgcttacgagtctcttgagctatctcgacttgttgtcaatcagaacaaaaagaatctt
ttggaaaactggttggctgaagacaaactggagtgtagcgaagaactaggagatcttgtc
aagactgtggacaatgatcttgctctgaaaatattcataaaggctagggcaacccctaaa
gtagttgctgcttttgctgaaagaagggaatttgacaagatccttatatattcaaagcag
gttggatacacccctgattacctcttcctcctccagaccattttacgtacagatccacag
ggagctgtcaactttgcgctcatgatgtcacaaatggaggggggctgtccagttgattac
aatactataactgatctcttccttcagaggaacatgatacgtgaggcaacggctttcctg
cttgatgttttaaagccaaacttgccagaacatgcttttcttcaaactaaggttttggag
atcaacttggtgacttacccaaatgttgctgatgccatccttgctaatggtatgttcagt
cattatgatcgcccacgtgttgctcagctttgtgaaaaggctggcttgtacttgcgagct
ctccagcattacacagaattaccagatataaagcgtgtcatggtgaatacccatgccatt
gagccacaggcacttgtcgagttctttggcaccctttcaagagaatgggcattggagtgc
atgaaggaccttctgctggtcaatctaagaggaaatcttcaaattgttgtacaggctgcc
aaagaatactctgagcagctaggggttgacgcttgcataaaactgtttgagcaattcaaa
tcttacgagggcctttactttttcttgggagcttatttgagttccagtgaggatccagat
attcatttcaaatacatagaagcagctgctaggactggacagatcaaagaagttgaacgt
gtaaccagagagtccaacttttatgatgcggaaaagacaaagaactttttgatggaagca
aagctgcctgatgcccgcccgctgattaatgtctgcgatcgctttggatttgttccagat
ttgacccactatctatatacaaataatatgcttcggtacattgaaggatatgtacagaaa
gtgaaccctggaaacgctccgttagttgttggacaactacttgatgatgagtgcccagaa
gatttcattaagggtttgattctgtctgtccgttctctccttcctgttgagccacttgtt
gatgaatgcgagaagaggaaccgcctacggctgctgacacaatttctggagcacttggtg
agcgagggtagccaagatgtccatgtgcacaatgcccttggaaaaatcatcattgacagc
aacaacaatcctgagcacttccttacgaccaatccattttacgactcccgtgtagttggt
aaatactgtgaaaagcgggatcctacccttgctgttgttgcttacagacgtggacagtgc
gatgatgaacttattaatgtcaccaataaaaactcactgttcaagttgcaagctcggtat
gtggttgaaagaatggatggtgatctgtgggataaagttctacagcctgaaaatgaatat
agaaggcaactcattgaccaagtggtttctacggcattgcctgaaagcaagagccctgag
caagtgtctgctgctgttaaggctttcatgacagctgacctccctcacgaactaattgag
cttcttgaaaagattgtcctacagaattctgcattcagtggaaacttcaatctgcagaac
ctgctcatcttgacagccatcaaggctgacccatccagggtcatggactatgtcaacagg
ctggacaactttgatgggcctgctgttggagaagtagctgttgaagcacagctgtttgag
gaggcatttgccatcttcaggaagtttaacttaaatgtgcaggctgtcaatgttctcttg
gataatatccgaagcatagaaagagctgaagagtttgcattccgtgttgaagaagatgct
gtttggacccaggttgccaaggcccagttgcgtgaaggtttggttagtgaagcaattgag
tccttcattcgtgcagatgatgcaacacatttccttgacgtcatccgtgctgccgaggaa
gctaatgtatatgatgatttagttaagtacttgcttatggtaaggcagaaggcaagggag
cccaaagttgatggagaactcatctttgcatatgctaagactgataggctcagtgatatt
gaagaattcattcttatgccaaatgttgccaatcttcaaaatgttggtgatcggctgtat
gatgaagaactatatgaagcagcaaagatcatctatgccttcatctcaaactgggcaaag
ctggctgtcacccttgttaagctgaagcagttccaaggtgctgtggatgctgcacgcaag
gctaacagtgctaaaacatggaaggaagtctgctttgcttgtgttgatgctgaggaattc
cgtctagcacaaatatgtggtctcaatattattgttcaggttgatgacttggaggaagta
agtgaatactaccagaacagaggatgtttcaatgaacttatttctctcatggaaagtgga
ctaggactggaacgtgcacacatgggcatcttcacagaattgggagtcctctatgctaga
tatcgccctgagaagctcatggaacacatcaaacttttctctacccgtctcaacatccct
aagcttatccgtgcttgtgatgaacagcaacattggaaagagcttacctacctatacatt
cagtatgatgaatttgacaatgctgccaccactattatgaaccattctccagatgcatgg
gatcatatgcaatttaaggatgttgctgttaaagttgcaaatgttgagctatactacaag
gcagtgcacttctatttgcaagagcatcctgatctcatcaatgaccttctcaatgtgctt
gcgcttcgtttggatcacacaagagtcgtggacattatgcgcaaggctggtcagttgcat
cttgtgaaaccatacatggttgcagttcagagcaacaatgtctctgctgtgaatgaagct
ttgaatgagctttatgttgaagaggaggattatgagagactccgtgaatcggttgatctg
catgatagctttgatcagataggtcttgcccagaagcttgagaagcatgaattgcttgag
atgaggaggattgctgcctacatttacaagaaggctggcagatggaagcagtctattgcc
ctatcaaagaaagacaacatgtacaaggattgcatggaaacatgctcacaatctggtgac
cgcgagctgtcagaagacttgcttgtgtatttcattgagcagggaaagaaagagtgtttt
gcttcttgcctatttatttgttatgacctgattcgcgcggatgttgctcttgagcttgca
tggatgaacaacatggtggactttgcattcccctatctattacagttcattcgtgagtac
acaaacaaggttgatgagttagtaaaggacaggattgagtcacagaatgaagtaaaggct
aaagagaaggaagaaaaggaacttgttgctcagcagaacatgtacgcccaactgcttcct
cttgccctgcctgctccacctggtatgggcgttcctccacctccaatgggtggaatgggc
atgcctccgatgggcggaatggggatgcctccgatgggtcctggacctatgccagcatac
gggatgccaccgatgggaagctactga

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