Oryza brachyantha (malo sina): 102716461
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Entry
102716461 CDS
T02995
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04142
Lysosome
obr04144
Endocytosis
obr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102716461
04142 Lysosome
102716461
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102716461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obr04131
]
102716461
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obr04147
]
102716461
Membrane trafficking [BR:
obr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
102716461
Exosome [BR:
obr04147
]
Exosomal proteins
Proteins found in most exosomes
102716461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
102716461
NCBI-ProteinID:
XP_040385584
LinkDB
All DBs
Position
12:206263..216573
Genome browser
AA seq
1708 aa
AA seq
DB search
MAAANAPIAMREALTLSSLGIAPQFVTFTHVTMESDKYICVRETSPQNSVVIIDMAMPNQ
PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPTKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGA
PERPQLVKGNMQLFSVEQQRSQALEAHAASFATFKVVGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQISQKYGLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAESSTTGGFYAINRRGQVLHATVNDATIVPFVSSQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIFIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRVAQLCEKAGLYLRALQHYTELPDIKRVMVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIVVQAAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGAYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWDKVLQPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEVAVEAQLFE
EAFAIFRKFNLNVQAVNVLLDNIRSIERAEEFAFRVEEDAVWTQVAKAQLREGLVSEAIE
SFIRADDATHFLDVIRAAEEANVYDDLVKYLLMVRQKAREPKVDGELIFAYAKTDRLSDI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDL
HDSFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD
RELSEDLLVYFIEQGKKECFASCLFICYDLIRADVALELAWMNNMVDFAFPYLLQFIREY
TNKVDELVKDRIESQNEVKAKEKEEKELVAQQNMYAQLLPLALPAPPGMGVPPPPMGGMG
MPPMGGMGMPPMGPGPMPAYGMPPMGSY
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccaacgcccccatcgccatgcgcgaggccctcacgctgagcagcctgggg
atcgcgccccagttcgtcaccttcacccacgtcaccatggagtccgacaagtacatctgc
gtccgcgagacctcgccgcagaacagcgtcgtcatcatcgacatggccatgcccaaccag
cccctccgcaggcccatcaccgccgactccgccctcatgaaccccaacacccgcatcctc
gccctcaaagctcaaatacctggaacaacacaggaccacctgcaaatcttcaatattgag
gctaaaacaaaaattaagtcccaccagatgcctgagcaggttgtgttttggaaatggatc
accccaaagttgctgggtttggtaacacaaacatcagtctatcattggtcaattgaggga
gattctgaaccaaccaagatgttcgataggacagctaatttggccaacaatcagattatc
aactatcgatgtgacccatctgagaagtggcttgtgcttattggaatcgcacctggtgct
ccagagaggccacaactggtgaaaggaaatatgcaacttttttccgtggagcagcagcgc
agtcaagcgcttgaagcccatgcagcatcctttgcaacatttaaggttgtgggcaatgag
aatccttcaactctcatctgctttgcctcaaagacaactaatgctgggcaaatcacttct
aagttgcatgttattgaattgggtgcccaaccagggaaaccagggttttccaagaagcaa
gccgatctctttttccccccagattttcaggatgattttcctgtagccatgcagatatct
cagaagtatggccttatctatgtaattacaaagcttggccttttgtttgtatatgacttg
gaaacagctgcagcagtctatagaaatagaattagcccagatcctatattcttgacagca
gagtcttctacaactggtggcttttatgccatcaataggagaggacaggttttacatgcc
acagttaatgatgcaaccatcgtgccttttgtcagcagtcaattaaataaccttgagtta
gctgtaaatctagccaaaagagctaatcttcctggggcagagaacctagttgtgcaaagg
tttcaggaactgtttgcgcaaacgaaatacaaggaagcagctgagttggctgcagaatct
ccccaaggtcttcttcgaactcctgagactgttgcaaaatttcagagtgttcctgttcaa
gctgggcaaacacctccactcttgcagtactttggcacattgctaactcgggggaagctc
aatgcttacgagtctcttgagctatctcgacttgttgtcaatcagaacaaaaagaatctt
ttggaaaactggttggctgaagacaaactggagtgtagcgaagaactaggagatcttgtc
aagactgtggacaatgatcttgctctgaaaatattcataaaggctagggcaacccctaaa
gtagttgctgcttttgctgaaagaagggaatttgacaagatccttatatattcaaagcag
gttggatacacccctgattacctcttcctcctccagaccattttacgtacagatccacag
ggagctgtcaactttgcgctcatgatgtcacaaatggaggggggctgtccagttgattac
aatactataactgatctcttccttcagaggaacatgatacgtgaggcaacggctttcctg
cttgatgttttaaagccaaacttgccagaacatgcttttcttcaaactaaggttttggag
atcaacttggtgacttacccaaatgttgctgatgccatccttgctaatggtatgttcagt
cattatgatcgcccacgtgttgctcagctttgtgaaaaggctggcttgtacttgcgagct
ctccagcattacacagaattaccagatataaagcgtgtcatggtgaatacccatgccatt
gagccacaggcacttgtcgagttctttggcaccctttcaagagaatgggcattggagtgc
atgaaggaccttctgctggtcaatctaagaggaaatcttcaaattgttgtacaggctgcc
aaagaatactctgagcagctaggggttgacgcttgcataaaactgtttgagcaattcaaa
tcttacgagggcctttactttttcttgggagcttatttgagttccagtgaggatccagat
attcatttcaaatacatagaagcagctgctaggactggacagatcaaagaagttgaacgt
gtaaccagagagtccaacttttatgatgcggaaaagacaaagaactttttgatggaagca
aagctgcctgatgcccgcccgctgattaatgtctgcgatcgctttggatttgttccagat
ttgacccactatctatatacaaataatatgcttcggtacattgaaggatatgtacagaaa
gtgaaccctggaaacgctccgttagttgttggacaactacttgatgatgagtgcccagaa
gatttcattaagggtttgattctgtctgtccgttctctccttcctgttgagccacttgtt
gatgaatgcgagaagaggaaccgcctacggctgctgacacaatttctggagcacttggtg
agcgagggtagccaagatgtccatgtgcacaatgcccttggaaaaatcatcattgacagc
aacaacaatcctgagcacttccttacgaccaatccattttacgactcccgtgtagttggt
aaatactgtgaaaagcgggatcctacccttgctgttgttgcttacagacgtggacagtgc
gatgatgaacttattaatgtcaccaataaaaactcactgttcaagttgcaagctcggtat
gtggttgaaagaatggatggtgatctgtgggataaagttctacagcctgaaaatgaatat
agaaggcaactcattgaccaagtggtttctacggcattgcctgaaagcaagagccctgag
caagtgtctgctgctgttaaggctttcatgacagctgacctccctcacgaactaattgag
cttcttgaaaagattgtcctacagaattctgcattcagtggaaacttcaatctgcagaac
ctgctcatcttgacagccatcaaggctgacccatccagggtcatggactatgtcaacagg
ctggacaactttgatgggcctgctgttggagaagtagctgttgaagcacagctgtttgag
gaggcatttgccatcttcaggaagtttaacttaaatgtgcaggctgtcaatgttctcttg
gataatatccgaagcatagaaagagctgaagagtttgcattccgtgttgaagaagatgct
gtttggacccaggttgccaaggcccagttgcgtgaaggtttggttagtgaagcaattgag
tccttcattcgtgcagatgatgcaacacatttccttgacgtcatccgtgctgccgaggaa
gctaatgtatatgatgatttagttaagtacttgcttatggtaaggcagaaggcaagggag
cccaaagttgatggagaactcatctttgcatatgctaagactgataggctcagtgatatt
gaagaattcattcttatgccaaatgttgccaatcttcaaaatgttggtgatcggctgtat
gatgaagaactatatgaagcagcaaagatcatctatgccttcatctcaaactgggcaaag
ctggctgtcacccttgttaagctgaagcagttccaaggtgctgtggatgctgcacgcaag
gctaacagtgctaaaacatggaaggaagtctgctttgcttgtgttgatgctgaggaattc
cgtctagcacaaatatgtggtctcaatattattgttcaggttgatgacttggaggaagta
agtgaatactaccagaacagaggatgtttcaatgaacttatttctctcatggaaagtgga
ctaggactggaacgtgcacacatgggcatcttcacagaattgggagtcctctatgctaga
tatcgccctgagaagctcatggaacacatcaaacttttctctacccgtctcaacatccct
aagcttatccgtgcttgtgatgaacagcaacattggaaagagcttacctacctatacatt
cagtatgatgaatttgacaatgctgccaccactattatgaaccattctccagatgcatgg
gatcatatgcaatttaaggatgttgctgttaaagttgcaaatgttgagctatactacaag
gcagtgcacttctatttgcaagagcatcctgatctcatcaatgaccttctcaatgtgctt
gcgcttcgtttggatcacacaagagtcgtggacattatgcgcaaggctggtcagttgcat
cttgtgaaaccatacatggttgcagttcagagcaacaatgtctctgctgtgaatgaagct
ttgaatgagctttatgttgaagaggaggattatgagagactccgtgaatcggttgatctg
catgatagctttgatcagataggtcttgcccagaagcttgagaagcatgaattgcttgag
atgaggaggattgctgcctacatttacaagaaggctggcagatggaagcagtctattgcc
ctatcaaagaaagacaacatgtacaaggattgcatggaaacatgctcacaatctggtgac
cgcgagctgtcagaagacttgcttgtgtatttcattgagcagggaaagaaagagtgtttt
gcttcttgcctatttatttgttatgacctgattcgcgcggatgttgctcttgagcttgca
tggatgaacaacatggtggactttgcattcccctatctattacagttcattcgtgagtac
acaaacaaggttgatgagttagtaaaggacaggattgagtcacagaatgaagtaaaggct
aaagagaaggaagaaaaggaacttgttgctcagcagaacatgtacgcccaactgcttcct
cttgccctgcctgctccacctggtatgggcgttcctccacctccaatgggtggaatgggc
atgcctccgatgggcggaatggggatgcctccgatgggtcctggacctatgccagcatac
gggatgccaccgatgggaagctactga
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integrated database retrieval system