Oryza brachyantha (malo sina): 102716594
Help
Entry
102716594 CDS
T02995
Name
(RefSeq) sister-chromatid cohesion protein 3
KO
K06671
cohesin complex subunit SA-1/2
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obr03036
]
102716594
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102716594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
HEAT_2
Cnd1
Motif
Other DBs
NCBI-GeneID:
102716594
NCBI-ProteinID:
XP_006654129
LinkDB
All DBs
Position
5:3766446..3774561
Genome browser
AA seq
1110 aa
AA seq
DB search
MDETLASLRRPKRGRPPRPREEDHAGLEDEDDAGAEGHARPQTKRKRAASAAAAAALEDQ
ALIDIIKHNGRLISLAAKKLVEDYESNPKSVVFQILSMLFEACGARHELYADYLDEADVD
SVVFSLVELAKKGMVEDNYNSKQKDLKNFKENLVSFWDTLVHECQNGPLFDDILFQKIKD
YVVALSCTPPRVYRQVASLIGLQLVTSFISVAKTLSGQRETTQRQLNAEKKKQSDGPIVE
SLNKRLAHTHESITYLEELMRKIFSGLFMHRYRDVDPEIRMSCIKSLGVWVVSYPSLFLQ
DIYLKYLGWTLNDKNAGVRRTSVLALQSLYEVDENIPSLGLFTERFYSRMIQLADDVDIS
VAVSAIGLIKQLLRHQLLSDDDLGPLYDLLIDEPPLIRRAIGELVYDHLIAQNIKTSQSG
ARDGNNDSSEVHIGRMLQILREFSDDPVLSSYVIDDIWDDMKAMKDWKCIISMLLDENPL
TELTDLDGTNLVRMLRASAKKAVGERIVPATDNRKLYYNKGQKEILESSKHEITTALLKK
YPQLLRKYISDKAKISPLIDMMMLMKLELYSLKRQDQNFKAAIDLIADAFFKHGDKDTLR
SCIKAITFCCTNCQADLQNYAENKLKNLEDELVLKVKTAIKEVEAGDDEYSLLVNLKRFY
ELQLSKPVTNDGLFEDMYRILSHLKDMDNEVKSFILLNMYVQLAWCLNAIDGENPSEASI
DDLLSKQSSLFEKLYYYLVVLPTYQKEGRSTTILSCRVCVITAEMWCLFKKPKYSSTRLE
SLGYLPQLDVVQNFWKLCEQQLSISDETEDEDANEEYIEDTNKDAVMIAAAKLVLADTVS
KDYLGPEIASHYVSHGASTTEIIKHLISSLRKNADSNMSALFFEALKRAYERYMAHVHEG
ENQALIGKSYSECQDLASRLAGSYVGASRNKNKSEILKIIQDGVSYAFEDLPKQLSFLEA
SLLPFVSKLPSSDIPDILMDVQKRTQDTNTNEDPSAWRPYFTFVEHLRDKHAKNEVLQEE
KEEKPVKRRGRPRKVRDVPARNLFDGHKSSDEESVSDSDQGHGEDDDNDDADQPLINTFR
SSASKLRSLKVSQQGTSGQKGPSRASGSNS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaccctagcctccctgcgccgcccgaagcgggggcggccgccgcggccgcgg
gaggaggaccacgcgggcctggaggacgaggacgacgcgggggccgaggggcacgcccgc
ccccagacgaagcgcaagcgcgccgccagcgccgcggcggcggccgcgctggaggaccaa
gccctcatcgatattatcaaacataatggcagacttatcagccttgctgccaaaaaattg
gtcgaggattatgaatcgaacccaaaatctgtggtgtttcagatattatcaatgctgttt
gaggcttgtggagctaggcatgagctttatgcagactacctggatgaggcagatgtggat
agcgttgtgttttcccttgttgagctagcaaaaaaaggtatggtggaagataattacaac
tctaaacagaaggatcttaagaactttaaagaaaatcttgtttccttttgggataccctg
gtccatgagtgtcagaatggcccattatttgatgatatcttattccaaaaaatcaaggac
tatgtggttgctttgtcatgtactcctccaagggtttatcgccaagtagcctcattgatt
gggctccagcttgtgacttccttcatatctgttgctaagactctcagtggacagcgtgag
accactcaaagacagttgaatgcagagaagaaaaaacagagtgatggaccgattgttgaa
tccctcaacaaaaggctagctcatactcatgaaagcattacttacttggaggaattaatg
cggaaaatattcagtgggttattcatgcaccgctatcgtgacgttgaccctgagatcagg
atgtcatgcatcaaatcactcggtgtttgggtcgtctcgtacccatcgcttttcttacaa
gatatatacctaaaatatctaggctggacacttaatgacaagaatgctggagttagaaga
acttctgtccttgccttacaaagcctgtatgaagtggatgaaaacataccttctcttggt
ctttttactgagagattttacagtagaatgatccagcttgcagatgatgttgatatttcg
gtagctgtgtcagctataggactcatcaagcaattactgaggcatcaacttttgagcgat
gatgatttaggtccactatacgatttgcttattgatgagcctccactgatcaggcgtgca
ataggggaattagtttatgatcatctgatagcacaaaacatcaagacctcccagtccgga
gcaagagatggaaacaatgattcatcagaagttcatattggtcgaatgctgcaaattctg
agggaattttccgatgatccagtcctgagctcttatgtcattgatgatatttgggatgac
atgaaggctatgaaagattggaagtgtataatatccatgcttctggatgaaaatccatta
actgagcttactgacttagatggaaccaacctagttcggatgctgcgagcctctgcaaag
aaggctgtcggggagaggatagttcctgcaacagacaatagaaagttgtactacaataaa
ggccagaaggaaatattggaaagtagcaagcatgaaataactactgctttgctgaagaag
tatccacagcttttaagaaaatacatatctgacaaagctaagatctcacctctaattgat
atgatgatgcttatgaaacttgagctgtactcattaaaaaggcaagatcagaatttcaag
gctgccatagatctcattgcggatgccttctttaaacatggtgacaaggataccttgagg
tcttgcatcaaggcaattactttctgttgcactaactgccaggcggatcttcaaaattat
gctgaaaacaaacttaagaatcttgaagacgagttggttttgaaagtcaaaactgcaatc
aaggaagtagaggcaggtgatgatgaatactccctcctggttaatttgaaacgattttat
gagcttcagctgtctaaacctgtcacaaatgatggtttatttgaggacatgtacagaatc
cttagtcatctaaaagatatggataatgaggtaaaaagctttatcctcctcaacatgtac
gttcaattagcatggtgcctgaatgcaattgatggtgaaaatccatctgaggcttccatt
gatgatcttctatccaagcaaagctctctttttgaaaaactctattattacttggtggtt
ctgcctacttatcagaaagagggaaggagcaccactatactttcctgcagagtctgtgtc
attactgcagagatgtggtgcttgtttaagaagccaaaatattcttcaacaaggcttgag
agtttgggatatctaccacaactagatgttgtccagaatttctggaaactgtgcgaacaa
cagctcagcatatcagatgaaacagaagatgaagatgcaaacgaagaatacattgaagac
acaaacaaggatgctgtcatgattgcagctgcaaagctagtgttagctgatacagtttca
aaggattacctgggcccagagattgcttctcactatgtatcccatggagcaagtactaca
gagataattaaacatctaatcagctcacttcggaaaaatgctgatagcaacatgtctgcc
ttattttttgaggcactgaaaagggcatatgagcggtatatggcccatgtacatgaaggg
gaaaatcaagccctcattggcaagtcttattcagaatgccaagatcttgctagccggctt
gcggggtcttatgttggtgcctcgcgcaataaaaacaagtctgagatcttgaagataatc
caagatggtgtttcttatgcctttgaggaccttccaaagcaattgtctttcctcgaggct
tctctcctgccatttgtttctaaacttccatcgtcagatataccagacatactgatggac
gtacagaagaggactcaagataccaatacgaatgaagatccaagtgcttggcgtccatac
tttacgtttgtagagcatctacgtgataagcatgcaaagaatgaggttttgcaggaggaa
aaggaggaaaagcctgtaaagcgtaggggtcggccaaggaaggttagagatgtacctgcg
aggaatctttttgatggacacaagtctagtgatgaagagtctgttagtgactctgaccaa
gggcatggcgaagacgacgacaacgatgatgcagatcagcctttgatcaacacgtttagg
tcttctgcatccaagctaagatcactaaaggtttctcaacaaggaacaagcggtcagaaa
ggaccttcaagggcatcaggaagcaacagctga
DBGET
integrated database retrieval system
