Oryza brachyantha (malo sina): 102716663
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Entry
102716663 CDS
T02995
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obr04131
]
102716663
Membrane trafficking [BR:
obr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102716663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
TPR_DOCK
Motif
Other DBs
NCBI-GeneID:
102716663
NCBI-ProteinID:
XP_015690797
UniProt:
J3LNE3
LinkDB
All DBs
Position
3:10335452..10349706
Genome browser
AA seq
1835 aa
AA seq
DB search
MDSAAATGEGQRFKRIPRQSLAGNLELDPLLNESLDQWPHLNELVQCYRADFVKDDCKYG
RYESVAPPSFQNQIFEGPDTELEKELQLSNDRQSKPDEVTEDDMPSTSGRQIYETEIPAS
SSKKHCSLSPLPAYEPAFDWENERSLIFGQRVPENVPAINSSGLKITVKVLSLSFQAGLV
EPFSGTICLYNKDRREKLSEDFYFHILPTEMQDAQISLDRRAVFSLDAPSPSACLLIQLE
KAATEEGGVTPSVYSRKEPVHLTEKEKQKLQVWSRIMPYRESFAWSMIPLFDSNQAGGAA
SPSSPLAPSMSGSSSQDSIVEPISKLTLDGKLNHYSSGSSVIVEISNLNKVKESYIEDSL
QDPKRKVHKPVKGVLKLEVEKLHNGHNDMDNVSEGGSMANDLNDAGELNNGRYSRSSFDG
IHGSLNSTAVTQKDAHQNGQASNTESGENFQAFDFRMMTRSEPFSQLFHCLYVYPLTIGL
SRKRNLFVRVELRKDDSDIRKPPLEAVHPRDRNTTLQKWAHTQIAVGTRMACYHDEVKIS
LPALLTPQHHLLFTFFHLDLQMKPEAPKPVVVGYAVLPLSTHIQLLSDISLPILRELAPH
YLQESGKERMDYLEDGKTVFRLRLRLCSSLFPVNERIRDFFVEYDRHTLHTSPPWGSELL
EAINSLKNVESTALLQFLQPILNMLLHLIGDGGETLQVAAFRAMVNILTRVQQESSDGAE
RNRFLVNYVDFAFDDFGDRQAPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLE
LIVKSMGLEQSRLFYHNLPLGEDVPPLQLKDGVFRCIMQLFDCLLTEVHERCKKGLSLAK
RLNSTLAFFCYDLLSIIEPRQVFELVSLYMDKFAGVCQSVLHDCKLTFLQIICDHDLFVE
MPGRDPSDRNYLSSVLIQEIFLTLDHDDLSQRAKAARILVVLICKHEFDARYQKSEDKLY
IAQLYFPLIGQILDEMPVFYNLNAVEKREVLVVILQIVRNLDDMTLIKAWQQSIARTRLF
FKLLEECITHFEHNKTGDSLLLGSSSRSPDAERPASPKYSDRLSPSVNAYLSEASRHEIR
PQGTPENGYMWNRVSPQLSSPNQPYSLREALAQAQSSRIGSTARALRESLHPVLRQKLEL
WEENLSTAVSLEVLGIIDKFSVAAASRSISTDYAKLDCVTSVLMGLLSRSQPLAFWKAFL
PVVYNIFNLHGATLMARENDRFLKQIAFHLLRLAVFRNDSIRKRAVVGLQILVRNSFNYF
KNTTRLRVMLTITLSELMSDVQVTQMKSDGSLEESGETQRLRKSLEEMADVRSKDLLKDC
GLPVAALEAAPEGSTDNRWSWVEVKHLSKCLVQALDAGLEHALLGSEMTLDRCAAAEGFY
KLAMAYAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVIMQALVGRNDAVWSKEH
VASLCKICPIVNADVNSEASAAEVEGYGASKLTVDSAVKYLQLANKLFAQAELYHFCASI
QELIIPVYKSRRAYGQLAKCHMSLKDIYESILDQEASPIPFIDATYYRVGFYGERFGKLN
KKEYVFREPRDVRLGDIMEKLSHIYEAKMDGNHTLHIIPDSRQVNADELQPGVCYLQITA
VDPVMEDEDLGSRRERIFSLSTGTVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQ
TEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSL
QRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFR
LIGEEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggattccgcggcggcgacgggggaagggcagcggttcaagcgtattccgcggcagtcg
ttggcggggaacctggagctggatccactgcttaatgaaagtttagatcaatggccacat
ctcaatgagctggttcagtgctatagggctgattttgtgaaagatgactgcaaatatgga
cgatatgaaagtgttgcaccaccatcgtttcaaaatcaaatttttgaaggacctgatacc
gaattagaaaaagaattgcagcttagcaatgatcggcaatccaagcctgacgaggttact
gaagatgatatgccgagtacgtcagggaggcaaatatatgagactgaaattcctgcatca
tcttcaaaaaaacactgcagtctatcacctttaccggcatatgaacctgcatttgattgg
gaaaatgagagatctttgatattcggccaacgggtgccagaaaatgtccctgcaataaac
agcagtggattgaagataactgtcaaggtgctatctttgtcattccaagctggattagtt
gagccatttagtggtacaatctgcttgtacaacaaagacagaagagaaaaattgtcagaa
gatttctattttcatatactcccaacagaaatgcaagatgctcagatttctctggaccgt
cgagctgttttttcattggatgccccttcaccatcagcatgccttctcattcagctagag
aaggctgccactgaggaagggggagtaacaccctctgtttattcccgaaaagaacctgtt
cacttgactgagaaagagaagcaaaaactgcaagtttggtctcgaatcatgccatataga
gagtcatttgcatggtctatgattcctctgtttgacagcaaccaggctggtggtgctgcc
tctcctagtagccctctagcaccaagtatgtcaggctcaagttctcaagatagtattgtg
gagcctatttccaagctcactttagatggaaagctcaatcattattcaagtggaagctca
gttattgtagagatatcaaatttgaacaaagtgaaggaaagctacatagaagactccctc
caagatcccaaaagaaaagtacacaaaccagtgaaaggtgtactaaagttagaggtggaa
aaacttcataatggtcacaacgacatggataacgtttctgagggtggtagcatggccaat
gatttgaatgatgctggcgagctcaataatggcagatacagcaggagtagctttgatggg
atccatggttctctgaattctactgctgttacccagaaagatgcgcatcagaatggtcaa
gcttctaatacagagagtggtgaaaattttcaagcttttgactttcggatgatgacacga
agtgaaccattttcacagcttttccattgcctttatgtgtacccactgactattggcttg
agccgtaaaagaaatctatttgtaagagtggaattgagaaaggatgattcggacatccgc
aaacctccattagaggctgttcatccaagggataggaacacaacactacagaagtgggca
catactcagattgctgttggaacgagaatggcttgctaccatgatgaagttaagatcagt
ctgcctgctcttttgacaccccaacatcatcttctgttcacgtttttccatttagatctc
caaatgaagcctgaagcgcccaaaccagttgttgtgggatatgctgtacttccactgtcg
acacacattcagttactttcagacatatctttgccaattttaagagaacttgctccacat
tacctacaggaaagtggaaaggagagaatggactatctggaggatggcaaaactgttttc
cggctgcggttaagactttgttcttcattatttccagttaacgaaagaatacgagacttt
tttgttgagtatgatcgccatacacttcatacaagtccaccttggggttctgagcttctt
gaggcaattaacagtttaaagaatgttgaatctactgcgctgttgcaatttctccaacca
atacttaatatgctgcttcatcttattggcgatggtggtgaaacccttcaggttgccgcg
tttcgagccatggtcaatattctaacccgggtccagcaggaatcatctgatggggctgag
agaaataggttccttgttaattatgttgattttgcttttgatgactttggtgatcgacaa
gcacctgtatatcctgggttgtctactgtttggggaagcctggctcggagcaaggctaaa
ggttatagagttggaccagtctatgatgatgtgctggcaatggcttggttttttctggag
cttattgtaaaatcaatgggattggaacaaagtcgtctcttttaccacaatcttccacta
ggtgaagatgtcccaccactacagttgaaagatggcgtcttccgatgtattatgcagctg
tttgattgccttctgactgaggttcatgaacgctgtaaaaagggtttaagtttggcaaag
cgcttgaacagcacacttgcttttttttgttatgaccttctatcaattattgagccacgc
caagtttttgagctggtttcgttatatatggacaaatttgcaggagtttgccaatcagtt
ctccatgactgcaaattgacatttcttcagataatatgtgaccatgatctttttgttgag
atgcctggtcgggatccatctgataggaattatctctcgtcagtccttattcaagagatc
ttcctcacccttgaccatgatgatctatctcagcgagcgaaagctgctcgcattttggtt
gttctaatatgcaagcatgaatttgatgcacggtatcaaaaaagtgaagacaagctgtac
attgctcagctgtattttcctcttatagggcagattctagatgagatgcctgtgttctat
aatctaaatgctgttgaaaagcgtgaagtgctagtagtcattttgcaaatcgtaaggaac
ttggatgacatgactctgatcaaagcgtggcaacagagtattgctagaaccagactgttc
ttcaagctacttgaagaatgtataacccattttgagcataacaaaacaggagacagcttg
ttactaggctcaagttcacggagccctgatgctgagcgccctgcgtctccgaagtactct
gatcggttatccccatcagttaatgcatatttgtccgaggcgtcacgccatgaaataagg
ccccagggaacaccagaaaatggatacatgtggaacagggtcagtcctcaactgagctct
cctaaccagccttattcattgagggaagcacttgctcaagcgcagtcttcaaggattgga
tcaacagcaagggcattgagagaatctctacatccagtgctgaggcaaaagttggaactt
tgggaagaaaatctcagtactgctgtgagccttgaagtgttgggaataatcgataagttt
tcggttgctgcagcttctcgtagcatcagtactgattatgcgaagctagattgtgtaaca
tctgtattaatgggtcttctgtcaaggagccagcccttagctttttggaaagctttcctt
cctgtggtatataatatatttaacctccatggtgcaacattgatggcgagggagaatgat
cgcttcttgaagcaaattgcttttcatcttctgcggcttgctgttttccggaacgattct
attagaaaaagggctgttgttgggttgcagatccttgttaggaactcatttaattacttt
aagaacaccacgaggttgagggtgatgttgacaattactttgtcagaacttatgtctgat
gtgcaagtaactcagatgaaatctgatggctctcttgaggaaagtggtgaaactcagcgc
cttaggaaatcactagaggaaatggctgatgtacgaagtaaggatttgttgaaagattgt
ggcctgcctgttgcagcactggaggcagcgcctgaaggttccactgataataggtggtct
tgggtggaagttaaacatctatccaaatgtctagtccaggcccttgatgctggtcttgaa
catgcccttttgggctccgaaatgactctggataggtgtgcggccgctgagggtttctat
aagctagcaatggcctatgcacccgttccagatcttcacataatgtggttgctgcatcta
tgtgatgcacaccaggagatgcaatcatgggctgaagctgcgcaatgtgctgttgctgta
gctggtgtgatcatgcaggcacttgttggaagaaatgatgctgtgtggagcaaggagcat
gttgcttccctatgtaagatttgccctattgtgaacgctgatgttaattcagaggcatct
gcagcagaagttgagggatatggtgcatccaagcttacagtagattcagctgtcaagtat
cttcagctcgcaaacaaactttttgcgcaagctgaactctatcacttttgtgctagcatt
caggaactcatcattcctgtgtacaaaagtagaagggcatatgggcagctggctaaatgt
catatgtcactgaaggacatatatgagtcaattcttgatcaggaggctagtcctatacca
tttatcgatgctacctactaccgggtagggttttatggggagcggtttggcaaactcaac
aaaaaggagtatgtgttcagagagccaagagatgttcgtcttggtgacattatggagaag
cttagtcatatctatgaggccaaaatggatggcaatcacaccttacacatcattcctgac
tcgagacaagtcaatgctgatgagttgcaacctggtgtctgctatctgcagataactgct
gttgatcctgtaatggaggatgaggacttggggagtagaagggaaaggattttctcttta
tctactggtactgttcgtgcacgtgtgtttgaccgttttcttttcgatacgccattcaca
aagaatggaaaaacacaaggtggcctggaagatcagtggaagaggcgcacagtgctccag
acagagggttcctttcctgctttggtgaatcgtctgctggtgatcaaatcagaatctctg
gagttttctcccgttgagaatgctattggaatgattgagacaaggacagctgccttgcga
aatgaactagaagaaccaaggagttccgaaggtgatcaactcccaagacttcaaagcctg
cagaggatactccaaggaagtgtggctgttcaggtaaatagtggtgtgttgagtgtgtgc
actgcattcttgtctggtgagcctgcaactaggctccgatcacaagaactgcagcagctc
atcgctgcattgctggaattcatggctgtctgcaagcgtgcaatccgtgtgcattttaga
ttgataggtgaagaagaccaggaattccacactcaactagttaacggctttcagtcgctc
accgctgagctttcacactatattcctgcaattctttcagagctataa
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