Oryza brachyantha (malo sina): 102717140
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Entry
102717140 CDS
T02995
Name
(RefSeq) phytochrome A
KO
K12120
phytochrome A
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
102717140
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
PAS_9
HATPase_c
HisKA
PAS_4
PAS_10
PAS_8
Motif
Other DBs
NCBI-GeneID:
102717140
NCBI-ProteinID:
XP_006650506
UniProt:
J3LS96
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Position
3:complement(23894654..23899128)
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AA seq
1128 aa
AA seq
DB search
MSASRPTQCSSSSSRTRQSSRARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRTTGPE
QQARSEKVIAYLHHIQRAKLIQPFGCLLALDEKSFNVIAFSENAAEMLTTVSHAVPSVDD
PPKLRIGTNVRSLFTDPGATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLV
VDFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRV
MAYKFHEDDHGEVFAEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSVK
IIEDETLHLDISLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNENEDDDEVGAEQPAQ
QQKRKKLWGLLVCHHESPRYVPFPLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQT
ILSDMLLRESSPLSIVSGTPNIMDLVKCDGAALLYGEKVWRLQNAPTESQIRDIASWLSD
VHRDSTGLSTDSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKH
DPSDKDDSRRMHPRLSFKAFLEVVKMKSLPWNDYEMDAIHSLQLILRGTLNDGIKSTRAA
SLDNQIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVD
EAIGRHILTLVEESSVPVVQRMLYLALQSKEEKEVKFEVKTHGSKRDDGPVILVVNACAS
RDLHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEW
NAAMTKLTGWHRDEVINKMLLGEVFDSSNASCLVKSKDAFVSLCILINSALAGDETEKAP
FSFFDRNGKYIECLLSVNRKVNADGIITGVFCFIQVPSHELQHALHVQQASQQTALTKLK
AYSYMRHAINNPLSGMLYSRKALKNTGLNEEQMKEVNVADSCHRQLNKILSDLDQDNITN
KSSCLDLEMVEFVLQDVFVAAVSQVLITCQGKGIRVSCNLPERYMKQTVYGDGIRLQQIL
SDFLFVSVKFSPVGGSVEVSCSLTKNSIGENLHLIDLELRIKHQGKGVPADLLSQMYEDD
DKDQSDEGLSLAVSRNLLRLMNGDVRHMREAGMSTFILTVELASAPAK
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttcaaggcctactcagtgctccagttcatccagcaggacccgccaaagctcc
cgagcgagaatattagcacaaacaacccttgatgctgaactcaatgctgaatacgaagaa
tctggtgactcctttgactactccaagttggttgaagcacagaggaccactggacctgag
cagcaagctcgttctgagaaggtcatagcctacttgcatcacattcaaagagcaaagcta
atccaaccatttggttgcttgttggccctcgatgaaaagagcttcaatgtcatagcattc
agtgaaaacgcagcagaaatgcttacaactgtcagtcatgcagtgccaagtgttgatgat
ccaccaaagctacgcatcggcaccaacgtacggtctcttttcactgacccaggtgccaca
gcattgcagaaggcactgggatttgcagatgtatccttgctgaaccctattctagttcaa
tgcaagacctcaggcaagcctttctatgccattgttcatcgggcaactggttgtttggtg
gtagattttgagcctgtgaaacctacagaatttccagcaactgctgctggggctttgcag
tcttacaaacttgctgccaaggcaatctctaagatccagtcactgccaggtggaagcatg
gaggtgctatgcaatacggtggtcaaggaactctttgacctcacggggtatgatagagtt
atggcttacaagttccatgaagatgaccacggcgaagtctttgctgaggtcacaaagcct
ggtcttgaaccttatcttggcctgcattatccagctactgatatccctcaagcagccagg
tttcttttcatgaagaacaaagtccggatgatttgtgactgtcgtgcaagatctgtcaag
attatcgaagatgagacactccacttggatattagcttgtgtggttcaacactgagggca
ccacacagttgtcaccttcagtatatggagaacatgaactcgattgcatcccttgtcatg
gctgttgtggttaatgagaatgaggatgatgacgaagttggggctgaacaacctgcacaa
cagcagaagaggaagaaactatggggactccttgtttgccaccatgagagcccaagatat
gttccttttccattgcggtatgcctgcgagttcttagcacaagtgtttgctgtccatgtt
aacaaggagtttgaattagagaggcaagtacgcgagaagagcatactgaggatgcaaaca
attctctctgacatgcttctcagggaatcctctcccctgagtatagtatcagggactccc
aacattatggaccttgtcaaatgtgacggtgctgcccttttgtatggggaaaaggtatgg
cggctacagaatgctccaactgagtctcagatacgtgatattgcctcctggctgtcagat
gtccatagggattccactggcctgagtactgatagcctacatgatgctggttatccggga
gctgctgctcttggtgatatgatttgtggaatggctgtagctaaaataaattccaaggat
attctgttctggttcaggtcacatacagctgctgaaatcagatggggaggtgcaaaacat
gatccatcagacaaggatgacagcagaaggatgcaccctaggctgtccttcaaggcattc
cttgaggttgtcaagatgaagagcttgccttggaatgactatgaaatggatgctattcac
tcattacaacttatacttagagggacgctgaatgatggcatcaagtcaacaagggccgct
agtttagataatcagattggtgatctcaaacttgatgggcttgctgaattgcaggcagtg
acaagtgaaatggtacgtctcatggaaacagcaactgtcccaatcttggctgtagatagc
aatggattggtcaatggatggaatcagaaggtcgccgagttgacagggctgagagtagat
gaggccattggaagacacatacttactcttgtagaagaatcttctgtaccagttgtccag
aggatgctgtatttagctttgcaaagcaaagaagagaaggaagtgaaatttgaggtgaaa
actcatggctccaagagagatgatggccctgttatcttggttgtgaatgcttgtgccagc
cgggaccttcatgaccatgttgttggtgtgtgctttgttgcacaagatatgactgttcat
aagttggtcatggacaaatttactcgggttgagggagactacaaggcaattattcacaat
ccaagcccactcattcctcccatatttggtgctgacgaatttggatggtgctctgagtgg
aatgctgccatgaccaaattgactgggtggcatagagatgaggtgatcaataagatgctt
cttggtgaggtgttcgatagtagcaatgcctcctgtcttgtgaagagtaaagatgcattc
gtaagtctctgcattctaataaacagtgcattagctggtgatgaaacagaaaaggctcca
ttcagcttcttcgaccggaatgggaagtatatcgagtgccttctatctgttaacagaaaa
gtaaatgcagatggtatcatcactggagtattttgtttcattcaagttcctagtcatgag
ctgcaacatgcactacatgtgcagcaagcctcacagcagactgcactaacaaagttgaag
gcttattcctacatgagacatgcaatcaacaaccctctctcaggtatgctctactctagg
aaagcactgaagaacacaggtctaaatgaagagcagatgaaggaggtcaatgtggcagat
agttgtcatcgccagctgaataagatactttctgacttggatcaggataacatcacgaac
aagtctagttgcttggatttggagatggttgagtttgtgttgcaagatgtgtttgtggct
gctgtaagtcaagtactgataacctgccagggaaaagggatcagagtctcttgcaaccta
ccagagagatacatgaagcaaacagtatatggggatgggattcgactgcagcaaatcctg
tctgatttcctattcgtctcagtgaagttctcccctgttggcggttctgttgaggtctct
tgcagcctgaccaagaacagcattggggaaaaccttcatctcatagacctagaacttagg
atcaagcaccagggcaaaggagtcccagcagatttgctgtcacaaatgtacgaggatgat
gataaggaccagtcggatgaaggcttgagcctcgccgtttctagaaacctgctgaggctt
atgaatggcgatgtccgtcatatgagggaagctggcatgtcaaccttcatcctcaccgtc
gaacttgcttcagctccagcaaaataa
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