KEGG   Oryza brachyantha (malo sina): 102717295
Entry
102717295         CDS       T02995                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03020  RNA polymerase
obr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102717295
  09124 Replication and repair
   03420 Nucleotide excision repair
    102717295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obr03021]
    102717295
   03400 DNA repair and recombination proteins [BR:obr03400]
    102717295
Transcription machinery [BR:obr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     102717295
  RNA polymerase III system
   RNA polymerase III
     102717295
  RNA polymerase I system
   RNA polymerase I
     102717295
DNA repair and recombination proteins [BR:obr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102717295
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat CTLH NA-iREase1
Other DBs
NCBI-GeneID: 102717295
NCBI-ProteinID: XP_006644871
UniProt: J3L518
LinkDB
Position
1:complement(26098193..26100787)
AA seq 210 aa
MSAGLVTEEAMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKFGESFHREDLLI
NKYKKNDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQE
LEPKIHLEIFQEAELLINIKEHVLIPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIA
RYYGLRRGQVVKIIRPSETAGRYVTYRYVV
NT seq 633 nt   +upstreamnt  +downstreamnt
atgtcggcggggctggtgacagaggaggcgatggtggggcggctggtgcggatccggcgg
acggtgatgcagatgctgcgggacagagggtacctggtggtggagcacgagctggccatg
ggccgccgcgacttcctccgcaagttcggcgagtccttccaccgcgaggacctcctcatc
aacaagtacaagaagaacgatccctccgaccagatatacgtgttcttccctaacgatgac
aaggtgggaatgaagcacataaagaagtacgtcgaaatgatgaaagctgagaacgtctcc
agagccgtgctggttcttcaacagaacctcactccgtttgcaaggtcatttcttcaggaa
ctagagccaaagatccacttggaaattttccaggaagccgaattgctcataaatatcaag
gaacatgttctcattcctgaacatcaagtgcttaccaatgaggaaaaaaagactttactg
gagcggtacactctaaaggaaactcagcttccaagaatacaaattacggatcctattgca
aggtactatggccttagacgaggacaggttgtgaagatcatcaggcccagcgagacagcc
ggcagatatgttacataccgctatgttgtatga

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