Oryza brachyantha (malo sina): 102717302
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Entry
102717302 CDS
T02995
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4
KO
K11644
paired amphipathic helix protein Sin3a
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obr03036
]
102717302
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
102717302
REST complex
102717302
Heterochromatin formation proteins
Other heterochromatin formation proteins
102717302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
DUF1722
EF-hand_13
Motif
Other DBs
NCBI-GeneID:
102717302
NCBI-ProteinID:
XP_006645435
UniProt:
J3KVQ3
LinkDB
All DBs
Position
1:complement(392128..401847)
Genome browser
AA seq
1446 aa
AA seq
DB search
MKRARDDALMGSQLKRPNVGRSDPTPQPQHMPLGGSASAAAPPPQAAAAPPAQPPTAAAA
AGQKLTTNDALVYLKAVKDKFQDKREKYEEFLEVMRDFKSERIDTNGVIIRVKTLFNGYP
ELILGFNTFLPKGYAIKLQEEKKPVDFVEAINFVNKIKNRFQHDEHVYKAFLDILNMYRK
DNKSIQDVYHEVAVLFADHKDLLEEFQHFLPDTSVPPQAVVSSRVPLLRRDGPSSMAPGS
RNLHNEKRERPHPSHPERDLSVDRPDLDHDRQRRRLEKEKERKADRDRRDYERDDKDGEH
DSKDLDIGRKRKPFPRKMEDPTNADAHHGVSLENHGILGASASSYDNKDALKSVYTQEFH
FCEKVKEKLEHDAYQEFLKCLHIYSQEIITRSELKNLVNDILQQHPDLMDGFNEFLEHCE
NIDGFLAGVFNKRQTGRIVKTEDKERDKEREREDRDRERDKEREKEQRERIEKGSSYKEV
ASQKPVFSSKEKYNIYKPVSELDLSNCQRCTPSYRLLPKHYPMPPAGNKTDLGASVLNDH
WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNAATKRVEELIEKMQDNS
LKPDSPIRIDEHLTPLNLRCIERLYGDHGLDVMDVLRKNASVALPVILTRLKQKQEEWSR
CRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKNLSTKSLLIEIKEINEKKRKEDDVLL
AIAAGNRRPIVPNMSFDYVDSNIHEDMYKIIKYSCGEVCGSSDQLDKVMRMWTTFLEPIL
GVQPRTHGAEDADAVKSKSRTTKSGLAIVGEINATASGAVAKQGHDESVPQEQTPSTPAR
LVNGVATDTQNGFHDADRTARRAEEPSNTAINGRAQGASPGTNEIPAVNAQNMSTERSAE
NIPVARTEQHGNTKANLEPTSGVNASRSSHAGNDAAAEARAGNETLPSVEGGETGRSGST
LNGGGTSEGNKGRLFNEASASHNTQKVEREEGELSPNGDFEEDNFVPFEDGAVDGVPKTK
EGSTSRPFQGRPGEAQPSCVEAAGENDADADDEGEESAQRSTEDSENASEAGEDASGSES
GDGEECSREDHDEEEEDMDHDDHDAKAESEGEAEGTTETHEVEGVSLPLSERFLYSVKPL
AKHVPTALHDRDEKPSRIFYGNDSFYVLFRLHQILYERLLSAKTNSSSAEKKWRTSKDTN
PPDLYAKFITALYNLLDGSSDNTKFEDDCRSIIGTQSYVLFTLDKLIYKVVKQLQAIATD
EMDNKLLQLYLYEKSRSPGRFFDLVYHENARVLLHEESIYRFECCSNPTKLSIQLMEYGH
EKPEVTAVSIDPNFSSYLFNEYLSSMSGSKLSEGVFLERNKRKHSNNDEPSDSLKAMDGV
KVANGLECKISCKTSKVSYVLDTEDFLFRLRKRRRLSPVGNVPEKLQVSKTYAAKVQRFH
RFLSKP
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgccagggacgacgcgctcatgggctcgcaactcaagcgccccaacgtcggt
cgatccgatccgaccccgcagccgcagcacatgcctcttggggggtcggcctcggctgca
gcgccgccacctcaggcggccgctgctccgcctgctcagccgcccactgctgctgcagcg
gctggccagaagctcacaacgaacgatgcgctcgtctacctcaaggccgtcaaggataag
ttccaggacaagagggagaaatacgaggagttcctcgaggtcatgcgcgatttcaagagt
gagagaattgataccaatggagtcattatccgtgtgaagacactgttcaacgggtaccct
gagctgatccttgggttcaataccttcttgcccaagggttatgcaatcaaactgcaggag
gagaagaagcctgttgatttcgtggaagccattaatttcgtaaacaagataaagaatcgg
ttccagcatgatgaacatgtctataaggcattcttagacatcctcaacatgtaccgcaag
gacaataaatccatccaagatgtttaccatgaggttgctgtattgtttgcagaccacaaa
gatttactcgaagagttccagcactttttgcctgatacctccgtgcctccacaagcagtg
gtctcttcaagggttcctttacttaggcgcgatgggccctcttcgatggcacctggtagt
aggaaccttcacaacgaaaagagggaaaggcctcatccatcacatcctgaacgtgactta
agtgttgatcgtcctgatctggaccatgatcgccagcgaagacgccttgagaaggaaaaa
gaacgtaaggcagacagggataggcgcgattatgaaagagacgataaggatggtgaacat
gacagcaaagatcttgatataggacgtaagcgcaagccttttccaaggaagatggaggac
cctactaatgctgatgcacaccatggagtgtctctggaaaatcatggaatacttggtgca
tctgcttcatcatatgataataaagatgcacttaagagtgtatacactcaggagttccat
ttctgcgaaaaagtgaaggagaagctggagcatgatgcttaccaggagtttttgaaatgc
cttcacatatacagccaggaaattattactaggagtgaattgaagaacttggtgaatgat
attcttcagcagcatccagatcttatggatgggtttaatgaattcttagagcactgtgag
aatatagatggttttctggctggtgtcttcaataaaaggcaaactggacgaattgttaaa
actgaggataaagaaagagacaaagagcgagagagggaggatagggacagagagcgggac
aaggaaagagaaaaggaacaacgggaaagaattgagaagggatcatcatataaggaagtt
gctagtcagaaacctgtgttctctagcaaagaaaagtataacatatacaaacctgtatca
gagcttgatctttcaaactgtcagcggtgcactccaagctaccgacttctacctaaacat
tacccaatgcctcccgcaggaaataagactgatcttggagcttcagtgcttaacgatcac
tgggtatcagtgacatcaggaagtgaagattattcttttaagcacatgagaaagaatcaa
tacgaagagagtttatttagatgtgaagatgacagatttgagttggacatgctattggaa
tcagttaatgcagcaaccaagcgtgttgaagagttgatagaaaagatgcaagacaactcc
ctaaaaccagatagcccaattcgcattgacgagcatttaactccgttgaatctgaggtgc
attgaacggttatatggtgaccatggtctggatgtgatggatgtccttcgaaagaatgcg
agtgttgccctacccgtcatattaactaggcttaaacagaagcaggaagaatggtcaagg
tgccgatcagatttcaacaaggtttgggcggagatctatgccaaaaattatcacaagtcc
cttgaccaccgcagtttctatttcaaacagcaagatacaaagaacctgagcacaaaatct
ctattgattgagatcaaagaaattaatgagaagaaaagaaaggaagatgatgtgctcctt
gctattgctgctggaaatagacgtccaatagttcccaatatgtcgttcgactacgtagat
tcaaacatacatgaagatatgtataagatcatcaagtactcctgtggtgaagtctgcggt
tcctcagaccaactggacaaagtgatgagaatgtggacaacttttctggagccaattttg
ggtgtacagcctcgaacacatggtgccgaggatgcagatgcagtcaaatccaagagtcga
accacaaagtctggtcttgcaattgttggtgaaatcaatgctactgcatcaggggctgtt
gccaagcaaggccatgatgaaagcgttccacaggaacaaacaccatcaactccagctaga
ttggtgaatggtgtagcaacagatactcaaaatggtttccatgatgctgatcgaactgct
cgtagggctgaggaaccatcaaatactgccataaatggaagagcacaaggtgcttcccct
ggaactaatgaaatacctgctgttaatgcccaaaacatgtctactgagagatctgcagag
aacattcctgttgctaggactgaacagcatggcaatactaaggcaaatctggagccgaca
tcgggtgtgaatgcttcaagaagttctcatgctgggaacgatgcagctgctgaagctcgg
gcaggaaatgaaacattaccatctgtagagggcggagaaaccgggaggtcaggatcaact
ttaaatggcggaggaacaagtgagggtaacaaagggcgcctatttaatgaagcttctgca
tcccacaatacccaaaaagttgaaagagaagagggtgaattatctcctaatggagatttt
gaagaggacaattttgtgccttttgaagatggggctgtagatggagtacctaaaacaaag
gaaggttccacaagcaggccattccagggtaggcctggagaagctcaaccatcttgtgtt
gaagcagctggtgagaatgatgctgatgctgatgacgagggtgaggaaagcgcacaaagg
tctactgaggacagtgaaaatgcctccgaggctggtgaagatgcatcaggaagtgaatcc
ggtgatggtgaggagtgttctcgtgaagatcacgatgaggaagaggaagatatggatcat
gatgatcatgatgccaaggctgaaagtgagggcgaggcagaaggaacaactgagacacat
gaggtggaaggagtatcactgccactatcggaacgctttctatactccgtaaaaccactt
gccaagcatgtgcccactgctttacatgaccgagatgaaaagccctcgcgtatattttat
gggaatgattcattttatgtactgtttaggctgcatcagatcttgtatgaaagattactt
tcagctaagacaaactcatctagtgctgaaaagaaatggagaacttctaaggatacaaac
ccacctgacctatatgcaaagtttataactgcactttacaacttgcttgatggttcttcg
gacaataccaagtttgaggatgattgccgttctattattgggactcagtcctatgttctg
tttactttggataaactgatatataaagttgtgaagcagcttcaagctattgccacagat
gaaatggacaacaagcttctccagctttatttatatgaaaagtcaagatcccctgggagg
ttctttgatctggtctatcatgaaaatgcccgcgttctcctccatgaagagagcatatac
cggtttgaatgttgctcaaatcctacaaagttgtctattcagctgatggaatatggtcat
gaaaagcctgaagtaactgcggtatcaattgatcccaatttctcatcatatctttttaat
gagtatctgtcaagtatgtcaggcagcaaattgtctgagggtgtcttccttgaaagaaat
aaacggaagcattcaaataacgacgagccttcagattcattgaaggccatggatggtgtc
aaagtcgctaatggccttgaatgcaagatatcctgcaagacttctaaggtctcatatgtc
cttgacactgaagattttttgtttcgattaagaaagaggaggagactttcacctgttgga
aatgtacctgagaagttgcaggtttcaaaaacatatgctgcaaaagtgcagcgcttccat
agatttctgtccaaaccttag
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integrated database retrieval system
