Oryza brachyantha (malo sina): 102717544
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Entry
102717544 CDS
T02995
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102717544
03036 Chromosome and associated proteins [BR:
obr03036
]
102717544
Spliceosome [BR:
obr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
102717544
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
102717544
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
HAT_Syf1_CNRKL1_C
PRP6_TPR
Lsm_interact
xRRM
TRM82_WD
UPF0223
Motif
Other DBs
NCBI-GeneID:
102717544
NCBI-ProteinID:
XP_006659057
UniProt:
J3MPT6
LinkDB
All DBs
Position
8:complement(634873..646380)
Genome browser
AA seq
838 aa
AA seq
DB search
MATPMEEDLPEAEAAAAVAGGDGDGEKPTQAPAAPPSDPDLDSSDSDDDGREGGVMLDEL
RIQAMERILQGQPLDYDSHVQYIRCLRKSGNIEKLRAAREEMNKCFPLTPKMWQEWTKDE
SSLRLESFENIEKLYERGVQEYLSVRLWRDYLDFVEENDKSVSQCSPSGLTKMRNLFEHA
ITAGGLHVTEGGKLWEAYREYEMAILTIIDDEEEKAKQVQRIRVLFHRQLSIPLADMEST
LAEYKSWEAEQGNANDPSSDFDGVPSNVVSAYKKAIEMYNVRKQYEDQLINGDVSDSDKL
QEFLKYIKFEESSGDPARVQVLYERAVSELPVVSDLWMGYTNYLDKTLKVPAVLKSVYHR
ATRNCTWVSELWVRYLLSLERIRASEEELRHVFEQAIQCSFPSIKEYLDIYLTRVDSLRR
RIADGLDFQLIRQTFMDATEFLSPQMGTEDLLLLHAYWAKLECTLGNDLASARGVWENTL
KKSGSVLEVWQHYIAMEIETGHIHEARSLYKRCYTKRFAGSGSEDICHAWIRFEREHGTL
DDYDLAVKKADPRLKELMMFKAQQEVKVDTYSVPKETTANDSSQKRKPSKMPTKQEPPAK
KRKDNPPKSAEPSDDQRSKEQSSTDNVKAGDVSGEKTEASMEMNLADSSRTEYTSSKESK
PNFYSDKCTAYVSNIDLTANEEHIRRFFSDVGGVTAIRLLRDKFTKKSRGLAYVDFLDNE
HLEAAIRKNKHKLLGKKVSVARSDPSKGKKSREAGSFSKDQDRLTASGDRGEKAVFASKS
DKEIPKDEPKIIGKNTFAAPRSVVKPLGWTKKDDKSDVGAEELKSNEEFRNLLLKKRC
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgatggaggaggacctgccggaggcggaggcggcggccgcagtcgccggt
ggcgacggagacggcgagaagcccacgcaggctcccgctgccccgccctcggaccccgat
ttggactcgtcggactccgacgacgacgggcgggagggcggggtcatgttggacgagctc
cgcatccaggccatggagcgcatcctccaggggcagcctctcgactacgactcacacgtg
cagtatatacgttgtttgaggaagtcaggcaacatcgagaagcttcgtgcagcaagggaa
gagatgaacaagtgtttcccacttacgcctaagatgtggcaggaatggaccaaagatgag
tcctcattgaggcttgaatcttttgaaaatattgaaaagctctatgaacgtggggtgcag
gaatatttgtctgttcggttatggcgtgattaccttgactttgttgaagagaatgataaa
tcagtgtcccaatgttcaccatctggactcacaaaaatgaggaatttgttcgaacatgct
atcactgcagggggcctgcatgtgactgagggcggcaagctgtgggaagcatatagggaa
tatgagatggccatcctcaccatcattgatgatgaggaggaaaaagcaaagcaagtacag
cggatacgtgttctctttcatcgccagttatccattcctttggctgacatggaatcgaca
cttgctgagtataagagctgggaagccgagcaaggtaatgctaatgacccaagttctgat
tttgatggtgttccctcaaatgttgtatcagcttacaaaaaggccattgagatgtacaat
gtgcggaaacaatatgaggatcaactgatcaatggggatgtgtctgatagtgacaaactg
caggaatttctgaaatacatcaaatttgaggagtcttcaggtgaccctgctcgtgttcaa
gttttgtatgaacgagctgtttcagagcttcctgttgtgagtgatctatggatgggatac
acaaattacctggacaaaaccctgaaggtacctgctgtcctcaaaagtgtttaccacaga
gccacaagaaactgtacttgggtcagtgaattatgggttcgttatttgctgtctttggaa
cgcattcgtgcatcagaagaggaactgcggcatgtctttgagcaggctatccagtgttct
tttccaagcataaaagagtacctcgatatctatcttactcgagttgatagtttaagacgg
aggatagcagatggattggatttccaactgattaggcagacattcatggatgctactgag
tttctttcaccccaaatgggaacagaggacttattgctcttgcatgcatactgggccaaa
ttagagtgtactcttggaaatgatctagcttcagctcgtggtgtttgggaaaatactctc
aagaaaagtggttctgttttggaagtctggcaacactacattgcaatggagatagaaact
ggacatattcatgaggctaggtcactttacaagcgctgttataccaaaaggtttgctggg
tctggatcagaggacatatgccatgcgtggataagatttgaaagggagcatggaacgtta
gatgattatgaccttgctgtaaaaaaggctgaccctcgtttgaaggagcttatgatgttc
aaggcacagcaggaggttaaagttgacacttactctgtccccaaagaaactacagctaat
gattcctctcagaaaagaaaaccaagtaaaatgcccaccaaacaggagcctcctgctaag
aaaaggaaagacaacccaccaaaaagtgctgagccatccgatgatcaacgatcaaaggaa
caaagtagcactgataatgtaaaagctggagatgtctcaggggagaagactgaggcatct
atggaaatgaatctggcagacagcagccgaacagaatatacatcttcaaaagaatcaaag
ccaaacttctacagtgacaaatgcactgcttatgtgtcaaacatagacttgacagcaaat
gaagagcatatccggcgcttcttttctgatgttggtggtgtgacagcaataaggttgctg
agggacaaattcaccaaaaaatcaaggggattagcgtatgtggattttttagacaatgaa
catcttgaggctgcaattagaaaaaacaaacataaattgcttggaaagaaagtaagtgtt
gctcgttcagatccaagcaagggcaagaaaagccgcgaggcaggatctttctccaaagac
caagatagattaactgctagtggtgatcgtggtgaaaaggcagtatttgctagtaagtca
gacaaggaaattcccaaagatgagccaaaaatcatagggaagaacacctttgctgcacca
cgatctgtggttaaacctcttggatggaccaaaaaggatgataaatcagatgttggtgca
gaagagttaaaatcaaatgaggaattcagaaatcttttacttaagaagcgatgctga
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