Oryza brachyantha (malo sina): 102717648
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Entry
102717648 CDS
T02995
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102717648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obr03400
]
102717648
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
102717648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
Motif
Other DBs
NCBI-GeneID:
102717648
NCBI-ProteinID:
XP_040383351
LinkDB
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Position
9:complement(14616121..14625317)
Genome browser
AA seq
1130 aa
AA seq
DB search
MQTIKRLPKSVHSSLRSSIILFDLSRVVEELVYNSIDANASKIDISVNVRACYVKVEDDG
CGITRDELVHVGEKYATSKFHNFMVDEGPNSTNFGLNGEALASLSDISVVEVRTKARGLP
NSYCKIIKGSKCSHLGIDEQREAVGTTVTVSELFYNQPVRRKQMQSSHKRELHHVKKCAL
RVALIHPQVLLRLFDIESEDELLYTIPSQSPLPLISNIFGNNISSYLHEIATSDRHLVLS
GYISRPTDVFCNKDFQYLYINSRFISKCPIHNMLDNLACSFQSSVRNEEIDVRSRKRQKN
EVYPAYLLNLCCPRSSYDLHFEPSQTIVEFKDWQTVMYFFEQTITSYWKKHALQLPEESN
QDILRNHDVQKKEDVADLYHTDMNFDTGAPAVPKDNYLSLDMEPSTWSDCYDQITDSSHR
GDFAKNGRKFGHKQICPPQSYSYQWLEDGSLLEDSDLSGANPTICKKQKTEDIFHRHAYS
GNFGLLQDAEIKIGPEIKLHPNKPDRMTCDFVQKQTNIEARVSGRDGFYVDFDRLNEPCL
LDEISETITGISFPEVSHFNDGFYPEDVSTSRGFCSVMKKSSKRQMNDNAVAQMNFRDMQ
AVCGSDYIDRPIEDTCLHSFHPFSLVDTPHSHSHARVGLELHGRSNKSINNRNYESIGSG
SRFTSDRFNMDPSIVFEDQTHLQSKKDAKMSYDISPEKSSTGCHLNIPFSKLANGSKCIE
DQYGCSQMPRLSKDRYRSHSAPPFYKGKSKLPRLTELLTKPTIEGGKDITINDSEDTAPA
QECTSHMNATQPIPETCSNEFSDLNFSLKGNVKICEEKFSGELDVSTASDEITKWRNNSD
QHTVLELQHGPFERYDDVLSISSGPLHLSCSVLVPECIDKNCFEEARVLLQLDKKFIPVI
SGEVLLLVDQHAADERIRLEELRRKVLSDDGRGITYLDSEEDLFLPETGFQLFQKYMQQI
QKWGWIINNSSDCSESFKKNMNVLRRQSRLVTLAAVPCILGADLTGKDLMDFIQQLDDTD
GSSAIPPAVIRILNFKACRGAIMFGDPLLPSECSLIIEELKATSLCFQCAHGRPTTVPIV
SLASLRDGLARLGTVSRRQAEAWHGLSHNKPSLERARTRLKELRKLRGGL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcagacaataaaacgcttgccgaaaagtgttcatagctccttgcgctcaagcattatt
ctgtttgacctatcaagggttgttgaggagctggtatataatagcattgatgcaaatgca
agcaagattgatatttcagtgaatgtcagagcatgttatgttaaagtggaagatgatggc
tgtggtattactcgtgatgaattggttcatgtaggagaaaaatatgcaacatccaagttt
cataatttcatggttgatgagggaccgaattccacaaatttcggattaaatggtgaagca
ctcgcatcactctctgatatctctgtggttgaagtcaggacaaaagctcgtggactacca
aattcatattgcaagataataaagggatccaaatgctcacatctgggaatagatgagcag
agggaagcagttggaaccacagttactgttagtgagctattttacaatcaacctgtacgc
aggaaacaaatgcaatctagtcataaaagagaactacatcatgtgaagaagtgtgctctg
cgagttgcactcattcatccgcaagttttactcaggctttttgatattgagagcgaagat
gagttgctatacacgattccttcacaatcacctttgcctcttatatcaaacatttttggg
aacaatatctctagctatcttcatgagatagctacctctgacaggcatttagttctttca
gggtacatctccagaccaacagatgtattctgtaataaggatttccagtacttgtatatc
aactcaagattcatcagtaaatgcccaattcacaatatgctcgataatctggcatgtagt
tttcaatcttctgtaaggaatgaggaaattgatgttcggagtaggaagaggcagaagaat
gaagtctaccctgcatacctgctaaacttgtgctgtcctagatcaagctatgatctacat
tttgagccttcacaaactattgtggaattcaaggattggcaaactgttatgtatttcttt
gaacaaactatcacaagctactggaagaagcatgcactgcaactgccagaagagtcaaat
caggacatcttaaggaatcatgatgtgcagaagaaggaagatgtcgctgacttgtaccat
acagacatgaactttgatacaggtgccccagcagtacctaaagacaattacctttctttg
gatatggagccatccacatggagtgactgctatgaccagatcactgattcatcccacaga
ggtgattttgctaagaatggtcggaagtttggtcataaacaaatatgtccccctcaaagt
tatagttatcagtggttagaggatggttccctgttagaagactctgatctttccggtgct
aacccaactatttgtaaaaagcaaaagacagaagatatattccataggcacgcatattca
ggcaactttggattgctgcaagatgcagaaatcaaaattggtccagaaattaaactccat
cccaataaaccagacagaatgacctgtgattttgtgcaaaagcaaaccaatatagaggca
cgtgtttcaggccgtgatggattctatgttgattttgatagattgaatgaaccatgtcta
ctcgatgaaatctcagaaacaatcactggcatttctttccctgaagtgtcacacttcaat
gatggattctatcctgaagatgttagcacctctaggggtttctgtagcgtcatgaaaaag
tccagcaaaaggcaaatgaatgataatgccgttgcccagatgaacttccgtgatatgcaa
gcagtgtgtggaagtgattacatagataggcccatcgaggatacatgtcttcattccttt
catccattctctttggttgatacacctcacagtcacagtcatgcaagggttggattggaa
ttgcatggaaggtcaaacaaaagcataaataataggaactatgaaagtatcggcagtggt
tctagatttacttcagacaggtttaatatggatccatcaatagtttttgaagatcaaaca
cacctgcaatcaaaaaaggatgcaaaaatgtcatatgatatttctcctgagaaaagttct
actggatgtcatttgaacatacctttttccaaactggcaaacggtagcaagtgtattgaa
gatcagtatggatgcagtcaaatgcccaggctttccaaagatagatataggagtcattct
gcaccaccattttacaaaggcaaaagtaaattacctagattaactgaactgctgactaaa
ccgactatagaaggtggtaaagatatcactattaatgactcagaagacactgcacctgct
caggagtgtacatcacatatgaatgcaactcagcctattcctgagacttgtagcaatgag
ttttctgacctaaatttcagcttgaagggaaatgtgaaaatatgtgaagagaaattttct
ggtgaacttgatgtttctactgcttcagatgaaataactaaatggcgcaacaactctgac
cagcatacagttttggagttgcaacatgggccttttgaacgctatgatgatgtacttagc
atttcttctgggcccttacatctctcatgtagtgttctagttcctgaatgtatcgataaa
aattgctttgaggaggcaagagttttgttgcagctggataagaaatttattcccgtgata
tctggggaagtactactccttgttgatcagcatgcagctgatgaaaggatacgtttggag
gaactccgccgaaaggttttatcagacgatggcagagggatcacttacttggattccgag
gaggacttatttctccctgagactggatttcaattgttccaaaagtatatgcaacagatc
caaaaatggggttggatcatcaacaattctagcgattgctctgaatcattcaaaaagaac
atgaatgttctgaggagacaatcacgccttgttactcttgctgctgttccgtgtattttg
ggtgctgatctgacaggaaaagatcttatggactttattcagcagcttgatgatactgat
gggtcatcagctatccctccagcagttatccgcatcctcaatttcaaagcttgcagaggt
gcgatcatgttcggtgatcctctgctaccgtctgagtgctctctgattatcgaagaactg
aaagcaacatctctatgcttccagtgtgctcatgggcgtcccaccaccgtgccgattgtg
agcttggcatctctccgcgacgggctggcgaggcttggaacggtgagccggaggcaggca
gaggcctggcacggtctctcgcacaacaaacccagccttgaacgtgctcgaacgcggcta
aaagaactgagaaagctacgtggtggtctgtag
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