KEGG   Oryza brachyantha (malo sina): 102717720
Entry
102717720         CDS       T02995                                 
Name
(RefSeq) pre-mRNA-splicing factor syf2
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102717720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obr03041]
    102717720
Spliceosome [BR:obr03041]
 Complex B
  Other components
   Prp19-related factors
    102717720
 Complex C
    102717720
SSDB
Motif
Pfam: SYF2 SoxA-TsdA_cyt-c Vanabin-2
Other DBs
NCBI-GeneID: 102717720
NCBI-ProteinID: XP_006656480
UniProt: J3MHJ7
LinkDB
Position
6:21233976..21236292
AA seq 338 aa
MGKESALASASAPGKSRPECINSSNPYHECSDYCLRKIAEARERLEEEQRPPADRTVHPD
CINASNPYHVCSEYCFKRIADAKSGLERAEQEPSDAAAARPEGDDDGDAQQEDAGAEDGY
PQMTEKQKKLFELRLKMNEARKANQQAMVAEKKRMEPRTESRGVSKQKWLEDRKKKIGKL
LDSNGLDMTKSYMLDTQETAEAKYKKWEKEPAPYGWDVFNQKTLYDAYKKRTKNIDVDME
AYNKAKEADPEFYRDASSLQYGKVSKVPEENIDRMVNELKERDEKRKAFSRRRKFHEDKD
IDSINDRNEHFNKKVERAFGKYTLEIKNNLERGTALPD
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggggaaggagtcggcgttggcgtcggcgtcggcgccggggaagtcgcggccggagtgc
atcaactcgtcgaacccctaccacgagtgctccgactactgcctccgcaagatcgccgag
gccagggagcgcctcgaggaagagcagcggccgccggcggaccgcaccgtccaccccgac
tgcatcaacgcctccaacccctaccatgtctgctccgagtactgcttcaagcggatcgcc
gacgccaaatcagggttggagcgtgcggagcaagagccatccgatgccgccgctgcccga
cctgagggtgatgacgatggtgatgcgcagcaggaggatgccggtgcagaggacggttac
ccgcagatgacagagaagcagaagaagctattcgagctgcggctgaagatgaatgaagct
aggaaggcaaatcagcaagcgatggtggcggagaagaagaggatggagcctcgcaccgag
agtagaggtgtttcgaaacaaaaatggcttgaagacaggaaaaagaaaattggaaagctg
ctcgactcaaatgggctagacatgacaaagtcttacatgcttgatacgcaggaaaccgcc
gaagcaaaatacaagaaatgggaaaaggagcctgcaccatatggttgggatgtttttaac
cagaagaccttatatgatgcatacaaaaagcgaaccaagaacattgacgttgacatggag
gcatacaataaagcaaaggaagctgatcctgaattttatcgggacgcttcaagtcttcaa
tatggaaaggtgtctaaggtgccagaagaaaacatagacaggatggttaatgagctcaag
gaacgggatgagaaacggaaagcattcagcagaaggcgcaagttccatgaagacaaggac
attgactcgatcaatgaccggaacgaacacttcaacaagaaggttgagagggcatttggc
aagtatactcttgagattaagaacaacctcgaaagggggactgccttgccagattaa

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