Oryza brachyantha (malo sina): 102717720
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Entry
102717720 CDS
T02995
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102717720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102717720
Spliceosome [BR:
obr03041
]
Complex B
Other components
Prp19-related factors
102717720
Complex C
102717720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
SoxA-TsdA_cyt-c
Vanabin-2
Motif
Other DBs
NCBI-GeneID:
102717720
NCBI-ProteinID:
XP_006656480
UniProt:
J3MHJ7
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All DBs
Position
6:21233976..21236292
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AA seq
338 aa
AA seq
DB search
MGKESALASASAPGKSRPECINSSNPYHECSDYCLRKIAEARERLEEEQRPPADRTVHPD
CINASNPYHVCSEYCFKRIADAKSGLERAEQEPSDAAAARPEGDDDGDAQQEDAGAEDGY
PQMTEKQKKLFELRLKMNEARKANQQAMVAEKKRMEPRTESRGVSKQKWLEDRKKKIGKL
LDSNGLDMTKSYMLDTQETAEAKYKKWEKEPAPYGWDVFNQKTLYDAYKKRTKNIDVDME
AYNKAKEADPEFYRDASSLQYGKVSKVPEENIDRMVNELKERDEKRKAFSRRRKFHEDKD
IDSINDRNEHFNKKVERAFGKYTLEIKNNLERGTALPD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagtcggcgttggcgtcggcgtcggcgccggggaagtcgcggccggagtgc
atcaactcgtcgaacccctaccacgagtgctccgactactgcctccgcaagatcgccgag
gccagggagcgcctcgaggaagagcagcggccgccggcggaccgcaccgtccaccccgac
tgcatcaacgcctccaacccctaccatgtctgctccgagtactgcttcaagcggatcgcc
gacgccaaatcagggttggagcgtgcggagcaagagccatccgatgccgccgctgcccga
cctgagggtgatgacgatggtgatgcgcagcaggaggatgccggtgcagaggacggttac
ccgcagatgacagagaagcagaagaagctattcgagctgcggctgaagatgaatgaagct
aggaaggcaaatcagcaagcgatggtggcggagaagaagaggatggagcctcgcaccgag
agtagaggtgtttcgaaacaaaaatggcttgaagacaggaaaaagaaaattggaaagctg
ctcgactcaaatgggctagacatgacaaagtcttacatgcttgatacgcaggaaaccgcc
gaagcaaaatacaagaaatgggaaaaggagcctgcaccatatggttgggatgtttttaac
cagaagaccttatatgatgcatacaaaaagcgaaccaagaacattgacgttgacatggag
gcatacaataaagcaaaggaagctgatcctgaattttatcgggacgcttcaagtcttcaa
tatggaaaggtgtctaaggtgccagaagaaaacatagacaggatggttaatgagctcaag
gaacgggatgagaaacggaaagcattcagcagaaggcgcaagttccatgaagacaaggac
attgactcgatcaatgaccggaacgaacacttcaacaagaaggttgagagggcatttggc
aagtatactcttgagattaagaacaacctcgaaagggggactgccttgccagattaa
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