Oryza brachyantha (malo sina): 102718150
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Entry
102718150 CDS
T02995
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102718150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obr03400
]
102718150
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
102718150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
IMS_C
US6
Motif
Other DBs
NCBI-GeneID:
102718150
NCBI-ProteinID:
XP_015688857
LinkDB
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Position
2:8096164..8098770
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AA seq
727 aa
AA seq
DB search
MPRPTASSSSRPPPAPAQEGELGSSRASSSSSADSSIASLIDRATSTTDPSVDPALLRAI
KSAARASDGAIRDAFRVLLSLMSKPHAHVRLLAFAITDELFMRSKLFRSLLADVLDGFLP
LVVGFRRAHPLPPPAASANVLRKAAVQALERWHHLFGAHYRQLRLAVEYLKESARVQFPG
LRPAVEARAAREARTQEILTAKVEQLRQNLAAIKAEIRSTVDEIRNGLDIIRIESEKFDN
HANDENEEQEIASLAMRTIRMASLMAGEWVHETQENEAVFDALRESYRLLVSKHLVTVQE
WISVLVRVNLADNRFRDSALKELIDVKNEIQAVRNRCSEIGLNLDNVHRRKGVQEEEDDG
FWVEGNIEARSPARVDTSTDVASSSKDTRKGKMPVGGAISDNGKAPNVGNRSRKLDPEMA
KLHAEAPVLPWSSVLDRWGSNGDAHVNQRGLEFESHWGRVDNDAVIPAAKIAELNVHSSI
YKEDPVEILPCRAPLKKGGLCQRRDLKVCPFHGPIVPRDAEGNPIAQSDGHCDEEGNPIG
QTSGCYDAAVSPTEQNEDSSDARENMIKPEGSSDGEYMHDSSPSRMANRNSDVSDSEVAP
DPRKITGEQLARQAVQNVRKRDRDDKARERAQRARIRQHNQDVLREAALASTSHSAAAYD
LPPSTVARRGRRGKTKAPTLASMLKKKVTSKDRIAERLLNARARDATIREVSHSEDMSYR
EAFPNQW
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccccaccgcctcgtcctccagccgccctccgccggcaccggcgcaggaaggg
gagctaggctcgagccgcgcctcctcctcctcctcggcggattcctccatcgcgtccctc
atcgaccgcgccacatccaccaccgacccctccgtcgacccggccctcctccgcgccatc
aagtccgccgcccgcgcctccgacggcgccatccgcgacgccttccgcgtcctcctctcc
ctcatgtccaagccccacgcccacgtgcggcttctcgccttcgccatcaccgacgagctc
ttcatgcgctcgaagctcttccgctccctgctggccgacgtgctggacggcttcctcccg
ctcgtcgtcggcttccgccgcgcccacccgctcccgccgcccgccgcctccgcgaacgtg
ctccgcaaggccgccgtccaggcgctcgagcgctggcaccacctgttcggggcgcactac
cgccagctccgcctcgccgtcgagtacctcaaggagtccgcccgggtccagttccctggc
ctccgtcccgccgttgaggctcgtgctgcgcgggaggctcgcacccaggagatcttaact
gcaaaggtcgaacagctgcgccaaaacctggccgcaatcaaggctgaaatccgctccacg
gttgatgagattcgcaatgggttagatatcatccgcatcgagagtgaaaaatttgacaat
catgcaaacgatgagaatgaggagcaggaaattgcctctttggcgatgcgtactatcagg
atggcttctttgatggctggggagtgggttcatgagactcaggagaatgaagcagttttt
gatgcattgagggagtcatatcggctccttgtgtcaaagcatttggtcacagttcaggaa
tggatatctgtgctggttagggtcaatcttgcagataatcgttttagagattctgctttg
aaggaactcattgatgttaagaatgaaatacaggcggtgagaaatcggtgtagtgagatt
ggtctcaatcttgacaatgtccataggcggaagggtgttcaggaggaagaggatgatggc
ttttgggttgaggggaatattgaggctcgtagtcctgctagagttgataccagcacagat
gttgcaagtagcagcaaggatactagaaagggaaagatgccagtgggtggagcaatttct
gataatggcaaggcacctaacgttggcaataggtcccgaaagttggatccagagatggca
aagctgcatgctgaagcccctgtgctgccatggagctctgtcttggatcgttggggttcc
aatggggatgcacatgtaaaccaaagggggcttgagttcgagagccattgggggagggtg
gataatgatgctgttatacctgctgcaaagattgcagagttaaatgttcatagttcaata
tataaagaagatccagttgagatcctaccttgtcgcgcacctctgaagaaaggaggcctt
tgccagagaagagatctcaaggtatgcccatttcatgggcctattgtcccacgagatgca
gaaggaaatccaattgctcagagtgatggccattgtgatgaagaaggaaatccaattggc
caaacttctggctgttatgatgcagcagtaagtcctactgagcagaatgaagacagttct
gatgcaagagagaatatgattaagccagagggaagcagtgatggtgaatatatgcatgac
tcctctccttcaagaatggcgaacagaaatagtgacgttagcgacagcgaggtagctcct
gatcccagaaaaattacaggggagcagttggcgagacaggcagtgcagaatgtccggaaa
agagatagggatgacaaagcacgggaaagagcccaacgtgcaagaattcgtcagcataat
caagatgttttgcgggaagcggctcttgcttcaacctcgcactcagcggcagcctatgac
ctccctccatcaacagtggctcgacgaggacgccgtggtaagacaaaggcaccaacactg
gcatcaatgctgaagaagaaagtcacttccaaagataggattgcggagaggcttctgaat
gctcgagctagggatgcgacaataagagaagtttcacatagcgaagatatgagctacaga
gaagcattcccaaatcaatggtag
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