Oryza brachyantha (malo sina): 102718182
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Entry
102718182 CDS
T02995
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102718182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102718182
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102718182
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
102718182
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
DUF4729
zf-RING_UBOX
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
102718182
NCBI-ProteinID:
XP_006656079
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All DBs
Position
6:complement(10087055..10089616)
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AA seq
311 aa
AA seq
DB search
MAKFTFDDADEDPPVASGAEKRKRDAGDDPVDGEAPRPRNSAVAAGSEQAVPGEGLADGE
VEGAGLNVQIDPDVLDCSICFDSLRPPLYQCQNGHVACSACWSKLNNKCHVCSRDANFAR
NIALEKIVESIKSSCSYAKWGCCKFINYAQRDTHEESCPFAPSVCPIYGCGYNGFTGHWS
QHFLSRHRSEVLRFIYSQPFNVNLEVSVPFLALLGEDDHLFLLLNNSMMPFGHALSVVCL
RTGNLNWKFSYEIEATSRKKPENRLQLKASVSNTKHWTGLYPAEAFLLVPCDFCNSSNIV
LNISIERCDVV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttcacctttgacgacgccgacgaggaccctcccgtcgcatctggcgccgag
aagaggaagcgcgacgcaggagatgaccctgtcgacggagaagccccccggccccggaat
tcggcggttgcggcgggcagcgagcaagcggtgcccggggagggcctggccgacggggag
gttgagggtgctggcctgaacgtgcagatcgaccctgacgtgctcgactgctccatctgc
ttcgactccctccgccctcccctctaccagtgccaaaatggccatgtagcatgttctgcc
tgctggtccaaactcaacaacaagtgtcatgtttgttctcgcgatgccaattttgcacga
aatattgcattggagaagattgttgaatcaatcaagtcctcatgctcttatgccaagtgg
ggttgctgcaaatttattaactacgcacaaagagatacccatgaagaatcttgtcctttt
gccccttcagtttgccctatttatggctgtggatataatggatttacaggacattggtca
caacacttcctttccagacatcgttctgaggttttgcggttcatctatagtcagcctttt
aatgtaaatcttgaggtatcagtgcctttcctagcacttcttggggaggatgatcaccta
ttccttctcctaaacaatagcatgatgcccttcgggcatgcactttcagtagtttgtcta
aggactggcaatctaaattggaagttctcctacgaaattgaagcaactagtagaaagaaa
cctgaaaacagactgcaactgaaggcttctgtctccaatacaaagcattggacaggtctt
tatcctgcagaagctttccttttggtcccgtgtgacttctgcaattctagcaacatagta
ctcaatatctccattgagaggtgtgacgttgtatga
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