Oryza brachyantha (malo sina): 102718194
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Entry
102718194 CDS
T02995
Name
(RefSeq) squalene synthase 8-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00100
Steroid biosynthesis
obr00909
Sesquiterpenoid and triterpenoid biosynthesis
obr01100
Metabolic pathways
obr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102718194
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
102718194
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
obr01006
]
102718194
Enzymes [BR:
obr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
102718194
Prenyltransferases [BR:
obr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
102718194
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
102718194
NCBI-ProteinID:
XP_040381919
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Position
7:3424702..3430785
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AA seq
406 aa
AA seq
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MGLVGAVLGPEAAALVRLRAAAWRLRREVPAGEHWAFAYSMLHRVSRSFALVIQQLGPDL
RNAVCVFYLVLRALDTVEDDTSIPTEIKVPILNEFHHHIYNRDWHFSCGTKDYKILMDKF
HYVLTAFLELGSGFQEAIEEITRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGIGLSR
LFHAAGLEDLAPESLSNSMSLFLQKVNITRDYLEDINETPKSRMFWPREIWSKYVDKLED
LKYEENSVNAVKCLNEMVTNGLIHTEDCLRYMSALKDIAILRFCAIPQVMALATYALCYN
NVNVFRGVVKMRRGLTARIINETNSMSDVYTAFYEFSSLLEEKIDENDPNASLTWKYVNA
IKESCKSSGMLKKRGYDLDRPKRNPAMTVMLLLLLVALLLGALYGR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggggttggtgggggcggtgctgggcccggaggcggcggcgctggtgcggctgcgggcg
gcggcgtggcggctgcggagggaggtccccgccggcgagcactgggccttcgcctactcc
atgctgcaccgcgtctcccgcagcttcgcgctcgtcatccagcagctcggcccggacctc
cgcaatgccgtgtgcgtcttctacctggtgcttcgggcgctcgacaccgtcgaagatgac
actagcatccctactgagattaaggtgcccattcttaacgaattccaccatcatatctat
aaccgtgattggcatttttcatgtggaacaaaggactacaagattctgatggataaattc
cactacgtcttgacagctttcttggagcttggctcaggattccaagaggcaattgaagaa
attacgagaagaatgggcgcaggaatggcaaagtttatatgcaaggaggttgaaaccgtt
gatgattatgatgagtactgtcactacgtggcagggctagtcggcattggactttcaagg
ctctttcatgctgctggtctagaagatcttgctcctgaatctctttctaattcaatgagt
ttatttttgcagaaagtcaacattactcgggattacctggaggacataaatgagacacca
aaatcacgcatgttctggccacgagaaatatggagtaaatatgttgataaacttgaggat
ctcaaatacgaagaaaattcagtgaatgcagtgaaatgcttgaatgagatggtaactaat
ggtttaatacatactgaagattgccttcgatatatgtctgctctaaaggatattgctatt
ctccgtttttgtgcaattccccaggtaatggcacttgcaacctatgctctgtgctataac
aacgtgaatgtatttcgaggagttgtgaagatgaggcgtggactgactgcacgaataatc
aatgaaacaaattcaatgtctgatgtgtacactgctttctatgaattctcttcattgctt
gaggagaagattgacgaaaacgatccaaatgcatcgcttacatggaaatacgtgaatgca
ataaaggagagctgcaaatcatccggcatgctgaagaaaaggggatatgacttggatagg
ccaaaacggaaccctgctatgaccgtgatgctgctgcttctcttagtagctcttttattg
ggagctctatacgggaggtga
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